Template:  JQ680365.1 strand: + 32685-32778 ref: 32685-32778
Variable:  JQ680365.1 strand: + 34710-34803 alnlen 93 mutations 8 involve-A 8 involve-T 0

32685      CGTCGAACCGCGTGAACCGTGGGTACAACTCGGCCCGCAACTTCAATTGGAACTCGTCCGGCAATCGGAACGTGAACCTCGGTTTCCGCCCCG 
           :::::  ::::::: :::::::::::::::::::::::: :::::::::: ::::::::::: ::::: ::::: ::::::::::::::::::
34710      CGTCGCGCCGCGTGCACCGTGGGTACAACTCGGCCCGCAGCTTCAATTGGTACTCGTCCGGCTATCGGTACGTGTACCTCGGTTTCCGCCCCG