Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  JQ680375.1 strand: + 23569-23643 ref: 23569-23643

Variable:  JQ680375.1 strand: + 25518-25592 alnlen 74 mutations 11 involve-A 10 involve-T 0

CCGCTCCCCGTATTCGTCGAACGCGAACAACGTGCGCTACGTGAACTCGGACGGGAGCCTCAACAACAACAACG (Template)
CCGTTCCCCGTATTCGTCGAGCGCGTACATCGTGCGCTGCGTGAGCTCGGACGGGAGCCTCACCGGCAGCGACG (Variable)