Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  LBQD01000003.1 strand: + 5918-6044 ref: 5918-6044

Variable:  LBQD01000003.1 strand: + 5177-5303 alnlen 126 mutations 17 involve-A 17 involve-T 0

CGGTACGGGCAATTTCTGGTCCGGTACCGAGTATAATACGACGAATGCGTGGAACGTCAATTTTTCCACGGGCAACACGAACAACAACAATAAGACGAATAGCAACTACGTTCGTTGTGTTCAAGG (Template)
CGGTACGGGCAATTTCTGGTCCGGTACCGAGTATGGTACGACGTATGCGTGGGTCGTCTATTTTTCCACGGGCGGCACGGGCAGCGGCAATAAGGCGACTAGCGGCTACGTTCGTTGTGTTCAAGG (Variable)
Template:  LBQD01000003.1 strand: + 96410-96526 ref: 96408-96526

Variable:  LBQD01000003.1 strand: + 95977-96093 alnlen 116 mutations 15 involve-A 13 involve-T 0

TTCGTCGCCAATGTGAACTTTAATTCCGATGGCAGGCTTAAGGTGAGCGTGAACCGGCTCGAGAATGACAATGTCTGGAATGCCGAGAATCGACATCGCTTTGTGTTTCCGAAACT (Template)
TTCGTCGCCGGTGTGGGCTTTGATTCCGGTGGCAGGCTTTGGGTGAGCGTGCACCGGCTCGAGAATGTGTATGTCTGGGATGCCGAGAATCGATATCGCTTTGTGTTTCCGCAACT (Variable)