Template:  LBQM01000001.1 strand: + 35848-35958 ref: 35848-35958
Variable:  LBQM01000001.1 strand: + 35399-35509 alnlen 110 mutations 24 involve-A 24 involve-T 0

35848      GTGTTCAATGTGAATCGCAACGATGACGGCAAGTCGTGGCTGAATGACAATTGGGCGAAGCCTGACAACAAGTGGAATGCTGACAATGAGATTGTCTTTCGCCTCCGAAA 
           ::::::  ::::  ::::  ::::: :::: :::::::::::  ::::  :::::::  :::::::  : :::::  ::::: :: :: : :::::::::::::::: ::
35399      GTGTTCCGTGTGGGTCGCGGCGATGGCGGCGAGTCGTGGCTGGGTGACCGTTGGGCGCGGCCTGACGGCGAGTGGGGTGCTGGCATTGGGGTTGTCTTTCGCCTCCGCAA