Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  LBSX01000014.1 strand: + 41219-41336 ref: 41219-41336

Variable:  LBSX01000014.1 strand: + 40709-40826 alnlen 117 mutations 28 involve-A 26 involve-T 1

TGCAATGCGGACGGCAACCGGCTCAATCTGAACTGGAACGATGGTCGGCTCAACTGCGACAACTGGAACTGGGATGACAATGACAACCCGAACATCGCCGTCGCCGCTCTGATGGTG (Template)
TGCATTGCGGGCGGGCGCCGGCTCCGTCTGGACTGGCGCGGTGGTCGGCTCGCCTGCGGCATCTGGCGCTGGGGTGCCGATGGCTTCCCGGGCCTCGCCGTCGCCGCTCTGGGGGTG (Variable)