Template:  LCCP01000016.1 strand: + 39268-39380 ref: 39268-39380
Variable:  LCCP01000016.1 strand: + 38826-38938 alnlen 112 mutations 16 involve-A 16 involve-T 0

39268      CCAGTTTTGGTACGCGATTCTTAATGTTAACGGCGACCAGCGTAATGTCAACGTCAACCAGAATCACCCTGATGACAAGTGGAACGAGAACTACCGCGTTCCTGTCCGCGAG 
           :: :::::::::::::::::::: ::::::::::: ::::::: ::::: :::::  ::::  :::::::: :: : :::::  :: : :::::::::::::::::::::::
38826      CCGGTTTTGGTACGCGATTCTTACTGTTAACGGCGTCCAGCGTGATGTCGACGTCCGCCAGGCTCACCCTGTTGGCCAGTGGCGCGGGCACTACCGCGTTCCTGTCCGCGAG