Template:  LCDH01000011.1 strand: - 21082-21193 ref: 21081-21194
Variable:  LCDH01000011.1 strand: - 21615-21726 alnlen 111 mutations 19 involve-A 18 involve-T 1

21193      CGGAACCACCGCGTGCCGGAAGTGAATCGGAACTTCGATAACGACTTCAACCGCAACCTCGGCAACTTCGAGAACCCGTGGAACGACAACAACGCCATCCTCTCGTTCTGC (revcomp)
           :::  :: ::::::::::: :::: :::::  ::::::  ::: :::: ::::: :::::::::::::::::: :::::::  :::: ::  :::: ::::::::::::::
21726      CGGTCCCCCCGCGTGCCGGGAGTGGATCGGCGCTTCGAGCACGGCTTCTACCGCGACCTCGGCAACTTCGAGAGCCCGTGGCTCGACGACCGCGCCCTCCTCTCGTTCTGC (revcomp)
Template:  LCDH01000011.1 strand: - 17715-17873 ref: 17716-17874
Variable:  LCDH01000011.1 strand: - 18598-18756 alnlen 158 mutations 18 involve-A 17 involve-T 0

17873      GGCTTTGTGGCGAACAACTATTGGTCTAGTACCACTGTCCCATCCAATAGCACATGGGCGTACAACGTCAACATGACCACGGGCAATATCAACAACAACAATAAGACCAACAACAACTACGTGCGGTGTGTTAGGTAGTCCGCGTCCGCTAGCACTCT (revcomp)
           :::::::::::: :: ::::::::::::::::: :::::::::::::::::::::::::::::: :::: :::::::: :::::::::::  : ::  : ::::: ::: : ::  :::::::::::::::::::::::::::::::::::::: :::
18756      GGCTTTGTGGCGGACTACTATTGGTCTAGTACCGCTGTCCCATCCAATAGCACATGGGCGTACAGCGTCGACATGACCTCGGGCAATATCGGCGACGGCTATAAGGCCACCGACTCCTACGTGCGGTGTGTTAGGTAGTCCGCGTCCGCTAGCATTCT (revcomp)