Template: LCFI01000001.1 strand: + 301488-301621 ref: 301472-301621 Variable: LCFI01000001.1 strand: - 303096-303229 alnlen 133 mutations 21 involve-A 20 involve-T 1 (on different strand) 301488 CCGATTCCGATGGCAATCCGAACGTCTTTAAACTCAAACGCAATGACGATGGTCTGTGGTTGAATGACAATTGGGCTAAACCGACCAATCAATGGAATCTCGACAATAGGTTTGTCTTCCGTATCCGAAAGTA :::::::::::::: ::::: :::::::: :::: : :::: ::::::::::::::::::: ::: : ::::::: : :::::: :::: ::: ::::: : :::::: ::::::::::::::: ::::: 303229 CCGATTCCGATGGCTATCCGTACGTCTTTGGACTCGAGCGCAGTGACGATGGTCTGTGGTTGTATGGCCGTTGGGCTGAGCCGACCGATCAGTGGGCTCTCGGCCATAGGTGTGTCTTCCGTATCCGCAAGTA (revcomp)