Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  LCFI01000001.1 strand: + 301488-301621 ref: 301472-301621

Variable:  LCFI01000001.1 strand: - 303096-303229 alnlen 133 mutations 21 involve-A 20 involve-T 1

CCGATTCCGATGGCAATCCGAACGTCTTTAAACTCAAACGCAATGACGATGGTCTGTGGTTGAATGACAATTGGGCTAAACCGACCAATCAATGGAATCTCGACAATAGGTTTGTCTTCCGTATCCGAAAGTA (Template)
CCGATTCCGATGGCTATCCGTACGTCTTTGGACTCGAGCGCAGTGACGATGGTCTGTGGTTGTATGGCCGTTGGGCTGAGCCGACCGATCAGTGGGCTCTCGGCCATAGGTGTGTCTTCCGTATCCGCAAGTA (Variable)