Template: LCPI01000003.1 strand: - 235532-235653 ref: 235515-235654 Variable: LCPI01000003.1 strand: - 235899-236020 alnlen 121 mutations 16 involve-A 13 involve-T 1 235653 ACGCGTGGTCGCGGTGAACGTGAACTGGAACGCCGAGAACGACGACTGGAACCTGAACGCCAACGGCTTGGACGACGACAGGTGGAATGACGGTAACTGCGTGTTCTCTCGCCGCTTACCT (revcomp) :::::::::::::::: ::::: ::::::::::: : ::::::::::: ::::: ::::: ::::::::::::::::: ::::: ::::::: :::::::::::::::: ::: : :: 236020 ACGCGTGGTCGCGGTGCGCGTGACCTGGAACGCCGGGGACGACGACTGGCACCTGGACGCCTACGGCTTGGACGACGACGGGTGGGGTGACGGTGTCTGCGTGTTCTCTCGCAGCTGATCT (revcomp)