Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  LCPI01000003.1 strand: - 235532-235653 ref: 235515-235654

Variable:  LCPI01000003.1 strand: - 235899-236020 alnlen 121 mutations 16 involve-A 13 involve-T 1

ACGCGTGGTCGCGGTGAACGTGAACTGGAACGCCGAGAACGACGACTGGAACCTGAACGCCAACGGCTTGGACGACGACAGGTGGAATGACGGTAACTGCGTGTTCTCTCGCCGCTTACCT (Template)
ACGCGTGGTCGCGGTGCGCGTGACCTGGAACGCCGGGGACGACGACTGGCACCTGGACGCCTACGGCTTGGACGACGACGGGTGGGGTGACGGTGTCTGCGTGTTCTCTCGCAGCTGATCT (Variable)