Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  LCQJ01000030.1 strand: - 5956-6060 ref: 5955-6061

Variable:  LCQJ01000030.1 strand: - 6299-6403 alnlen 104 mutations 18 involve-A 18 involve-T 0

GGTTCCCGCAACCGCGATGGCAACGTGCCGAACGCGAACTGGAACGACAAGTTCAACGTCAACTGGTACAACTCGACGAATCGCAATCCGAACCTCCGTTCCCG (Template)
GGTTCCCGCGACCGCGGTGGCGACGTGCCGTACGCGGACTGGGGCGGCAAGTTCCTCGTCTACTGGTGCGGCTCGGCGGATCGCAGTCCGTACCTCCGTTCCCG (Variable)