Template:  LCQW01000004.1 strand: - 11764-11877 ref: 11765-11878
Variable:  LCQW01000004.1 strand: - 12194-12307 alnlen 113 mutations 20 involve-A 17 involve-T 1

11877      ACAAATGGCTCTGGGCTGTGAACGCGAACTGGAACGGTGACGGCTGGGATGTCGAGGCCAACTCGATTAGCAATCCGAACAGCTGGAATGCCGGCAACGAGTTCGTTTCCCGC (revcomp)
           ::::   :::::::::::::: :::: ::::: :::::: :::::::: :::::::::: ::::: ::::   ::::  : :::::  :::::::  ::::::::::::::::
12307      ACAATGTGCTCTGGGCTGTGAGCGCGCACTGGTACGGTGGCGGCTGGGGTGTCGAGGCCTACTCGCTTAGGCTTCCGTTCGGCTGGCGTGCCGGCCGCGAGTTCGTTTCCCGC (revcomp)
Template:  LCQW01000004.1 strand: - 26632-26741 ref: 26626-26745
Variable:  LCQW01000004.1 strand: - 27121-27230 alnlen 109 mutations 12 involve-A 10 involve-T 1

26741      GCTCCAGGCGTTTGGCTGGCGGCAACTCCGACAACGGCGGTCTTTCGCACGTCTATTGGGATACGCCTGACAACCGGAACGACAACAGCGGTTTTCGCCCCCTGTCCGT (revcomp)
           ::::::::::::::::::::::: :::::: :  :::::::::::::::::::: ::::: : :::::::: ::::::::: :::: :::::::::::::::::  :::
27230      GCTCCAGGCGTTTGGCTGGCGGCTACTCCGCCCTCGGCGGTCTTTCGCACGTCTGTTGGGCTTCGCCTGACTACCGGAACGGCAACGGCGGTTTTCGCCCCCTGATCGT (revcomp)
Template:  LCQW01000004.1 strand: - 26637-26744 ref: 26626-26745
Variable:  LCQW01000004.1 strand: - 28070-28177 alnlen 107 mutations 14 involve-A 12 involve-T 1

26744      AAAGCTCCAGGCGTTTGGCTGGCGGCAACTCCGACAACGGCGGTCTTTCGCACGTCTATTGGGATACGCCTGACAACCGGAACGACAACAGCGGTTTTCGCCCCCTG (revcomp)
           :: ::::: ::::: ::::::::::: :::::::: ::::::::::::::::::::: :: :: :::::::: : ::::: ::: : :: :::::::::::::::::
28177      AAGGCTCCGGGCGTCTGGCTGGCGGCCACTCCGACTACGGCGGTCTTTCGCACGTCTCTTCGGTTACGCCTGCCTACCGGCACGGCTACTGCGGTTTTCGCCCCCTG (revcomp)