Template:  NC_004456.1 strand: + 28835-28950 ref: 28835-28950
Variable:  NC_004456.1 strand: + 28260-28375 alnlen 115 mutations 7 involve-A 7 involve-T 0

28835      CCGATTCCCGCTTCGCGGGGGCAACTGGAACAATGGCTCGAACGCCGGGCTGGGCGCGCTCAATCTGAACAATGCGCGGTCGAACTCGAACAGTAACATCGGTTTTCGCCCCGCT 
           ::: :::::::::::::::::: :::::::::::::::::: ::::::::::::::::::: :::::: : :::::::::::::::::::::::: :::::::::::::::::::
28260      CCGGTTCCCGCTTCGCGGGGGCTACTGGAACAATGGCTCGAGCGCCGGGCTGGGCGCGCTCTATCTGAGCTATGCGCGGTCGAACTCGAACAGTAGCATCGGTTTTCGCCCCGCT