Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NC_008639.1 strand: + 506727-506851 ref: 506727-506851

Variable:  NC_008639.1 strand: + 506181-506305 alnlen 124 mutations 15 involve-A 15 involve-T 0

CTTTTCGTTGCGCGGGGGTTCGTGGAACAACAAATCTGCCAATCTGTCTTGCTCTGCCCGGAACAACAACAATCCGGACAACAGGAACAACAATATCGGTTTTCGTGTTGTTCGTCCCAATCAT (Template)
CTTTTCGTTGCGCGGGGGTTCGTGGGGCAACAAATCTGCCAATCTGTCTTGCTCTGCCCGGGTCGTCGTCAATCCGGACCTCAGGAACGGCGTTATCGGTTTTCGTGTTGTTCGTCCCAGTCAT (Variable)
Template:  NC_008639.1 strand: + 506727-506851 ref: 506727-506851

Variable:  NC_008639.1 strand: + 510879-511003 alnlen 124 mutations 16 involve-A 16 involve-T 0

CTTTTCGTTGCGCGGGGGTTCGTGGAACAACAAATCTGCCAATCTGTCTTGCTCTGCCCGGAACAACAACAATCCGGACAACAGGAACAACAATATCGGTTTTCGTGTTGTTCGTCCCAATCAT (Template)
CTTTTCGTTGCGCGGGGGTTCGTGGCTCAACTTATCTGCCAATCTGTCTTGCTCTGCCCGGATCTTCGTCAATCCGGTCAGCAGGAACTACGGTTTCGGTTTTCGTGTTGTTCGTCCCAGTCAT (Variable)