Template:  NC_009036.1 strand: - 11194-11329 ref: 11195-11330
Variable:  NC_009036.1 strand: - 12094-12229 alnlen 135 mutations 16 involve-A 16 involve-T 0

11329      CGCGCGCGGTTGGCCGACCAACAACAACTATTGGTCGGTGACACCTGATGGTTCTAACTATTACAACGTGAACCTCAACAATGGTAACGTCAACAGCAACAATCCGAGCAACACGAACTACGCATCCTGCGTCTC (revcomp)
           :::::::::::::::: :::::: : :::::::::::::::::::::::::::::  :::::::  :::: :::::: ::::::: :::::: :::::::  :::: :: ::::: :::::::::::::::::::
12229      CGCGCGCGGTTGGCCGGCCAACACCTACTATTGGTCGGTGACACCTGATGGTTCTGGCTATTACGGCGTGGACCTCAGCAATGGTTACGTCAGCAGCAACGGTCCGGGCGACACGTACTACGCATCCTGCGTCTC (revcomp)