Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray Template: NC_009428.1 strand: + 1350820-1350940 ref: 1350820-1350940 Variable: NC_009428.1 strand: + 1350275-1350395 alnlen 120 mutations 10 involve-A 9 involve-T 0 AGCGGATGCCGATCCGCGGAGGCAACTGGAACAACGGTGCCTCGGCGGGTGTGTGGGCGCTGAACGCGAACAACGCGCGGTCGAACGCGAACACGAACATCGGGTTTCGCCCCGCTTCCG (Template) AGCGGATGCCGATCCGCGGAGGCAACTGGGCCAACGGTGCCTCGGCGGGTGTGTGGGCGCTGGGCGCGACCTACGCGCGGTCGATCGCGAACACGAGCCTCGGGTTTCGCCCCGCTTTCG (Variable) Template: NC_009428.1 strand: + 1350820-1350940 ref: 1350820-1350940 Variable: NC_009428.1 strand: - 2122468-2122588 alnlen 120 mutations 10 involve-A 9 involve-T 0 AGCGGATGCCGATCCGCGGAGGCAACTGGAACAACGGTGCCTCGGCGGGTGTGTGGGCGCTGAACGCGAACAACGCGCGGTCGAACGCGAACACGAACATCGGGTTTCGCCCCGCTTCCG (Template) AGCGGATGCCGATCCGCGGAGGCAACTGGGCCAACGGTGCCTCGGCGGGTGTGTGGGCGCTGGGCGCGACCTACGCGCGGTCGATCGCGAACACGAGCCTCGGGTTTCGCCCCGCTTTCG (Variable)