Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NC_009633.1 strand: - 2593263-2593378 ref: 2593258-2593379

Variable:  NC_009633.1 strand: - 2593830-2593945 alnlen 115 mutations 12 involve-A 11 involve-T 0

GTTGCCGTATTTCGGTGGCAACTGGAACAACACGTCCAATGCTGGGGTGTTCGCTGTGAACTTGAACAACCCTCGGTCTAACGTGAGTACGAACATTGGGTTCCGCTCCGCTCAT (Template)
GTTGCCGTATTTCGGTGGCCGCTGGGACCTCACGTCCAATGCTGGGGTGTTCGCTGTGAGCTTGGGCAACCCTCGGTCTCACGTGAGTACGCTCATTGGGTTCCGCTCCGCTTAT (Variable)