Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NC_010113.1 strand: - 51029-51145 ref: 51030-51146

Variable:  NC_010113.1 strand: - 51587-51703 alnlen 116 mutations 12 involve-A 11 involve-T 1

AATCGTTTCCCGCTACGCGGTGGCAACTGGAACAACGGCTCCAACGCCGGCTTGGGGGCGCTCAATCTGAACAATCATCGCTCCAACTCGAACAGTAACATCGGTTTCCGTCCCGC (Template)
AATCGTTTCCCGCGACGCGGTGGCTACTGGAACAACGGCTCCAACGCCGGCTTGGGGGCGCTCACTCTGCGCCCTCATCGCTCCGACTCGAGCGGTGGCATCGGTTTCCGTCCCGC (Variable)