Template:  NC_011420.2 strand: + 1185156-1185258 ref: 1185156-1185258
Variable:  NC_011420.2 strand: + 1157862-1157964 alnlen 102 mutations 9 involve-A 8 involve-T 1

1185156    CGGCGGCAACTGGAGCAACGGGTCGAACGCGGGCCTCTTCAACCTGAACCTGAACAACGCCCCGTCGAACTCGAACACGAACATCGGTGGCCGCCTCGCGAA 
           :::::::: :::: ::: ::::::: ::::::::::::::: ::::: :::::::::::::::: ::::::::  :::::::::::::::::::::::::::
1157862    CGGCGGCAGCTGGGGCAGCGGGTCGTACGCGGGCCTCTTCAGCCTGACCCTGAACAACGCCCCGGCGAACTCGTGCACGAACATCGGTGGCCGCCTCGCGAA 
Template:  NC_011420.2 strand: + 1185156-1185258 ref: 1185156-1185258
Variable:  NC_011420.2 strand: + 1184334-1184436 alnlen 102 mutations 12 involve-A 11 involve-T 0

1185156    CGGCGGCAACTGGAGCAACGGGTCGAACGCGGGCCTCTTCAACCTGAACCTGAACAACGCCCCGTCGAACTCGAACACGAACATCGGTGGCCGCCTCGCGAA 
           ::::::: ::::::::: ::::::: ::::::::::::::   ::::::::::::: :::::::::: ::::: :: ::: : :::::::::::::::::::
1184334    CGGCGGCGACTGGAGCAGCGGGTCGTACGCGGGCCTCTTCCCGCTGAACCTGAACAGCGCCCCGTCGTACTCGCACTCGAGCCTCGGTGGCCGCCTCGCGAA