Template:  NC_012724.2 strand: - 1687264-1687354 ref: 1687265-1687355
Variable:  NC_012724.2 strand: - 1688412-1688502 alnlen 90 mutations 10 involve-A 10 involve-T 0

1687354    TCCGGCTGGGCGTGGTGCCAGAACTTCAACAACGGCAACCAGAACAACAACCACCAGAACAACGAGTTCCGAGCCCGAGCCGTCCGCAGA (revcomp)
           ::::::::::::::::::::: :::::  : ::::: :::::  :: :: :::::::::: :::::::::::::::::::::::::::::
1688502    TCCGGCTGGGCGTGGTGCCAGGACTTCGGCTACGGCGACCAGGGCAGCAGCCACCAGAACTACGAGTTCCGAGCCCGAGCCGTCCGCAGA (revcomp)
Template:  NC_012724.2 strand: - 1687264-1687354 ref: 1687265-1687355
Variable:  NC_012724.2 strand: - 1687905-1687995 alnlen 90 mutations 14 involve-A 14 involve-T 0

1687354    TCCGGCTGGGCGTGGTGCCAGAACTTCAACAACGGCAACCAGAACAACAACCACCAGAACAACGAGTTCCGAGCCCGAGCCGTCCGCAGA (revcomp)
           :::::::::::::::::::::  ::::: :: ::::  :::: :: ::  :: ::::  : :::::::::::::::::::::::::::::
1687995    TCCGGCTGGGCGTGGTGCCAGGGCTTCAGCAGCGGCGGCCAGGACTACGGCCGCCAGCTCGACGAGTTCCGAGCCCGAGCCGTCCGCAGA (revcomp)