Template:  NC_017911.1 strand: - 2197830-2197933 ref: 2197831-2197934
Variable:  NC_017911.1 strand: - 2199245-2199348 alnlen 103 mutations 14 involve-A 13 involve-T 0

2197933    AGGTCGCAGCGCTCCGCCAACAACGCCTACAACATGGACTTTGAAGATGGCTGGCTCAACAACAACGACAAGAACAACGAGCGGCTCGCGCGCCCTGTCCGCA (revcomp)
           :: ::::::::::::::: :: ::::::::  ::::::::::: ::::::::::::: ::  : ::::::::  :  ::::::::::::::::::::::::::
2199348    AGTTCGCAGCGCTCCGCCGACTACGCCTACGGCATGGACTTTGGAGATGGCTGGCTCGACTTCGACGACAAGTTCCTCGAGCGGCTCGCGCGCCCTGTCCGCA (revcomp)
Template:  NC_017911.1 strand: - 2197866-2197930 ref: 2197831-2197934
Variable:  NC_017911.1 strand: - 2198564-2198628 alnlen 64 mutations 11 involve-A 11 involve-T 0

2197930    TCGCAGCGCTCCGCCAACAACGCCTACAACATGGACTTTGAAGATGGCTGGCTCAACAACAACG (revcomp)
           ::::::::::::::: ::  :::::::  ::::: ::::: :::::::::::::: :  :: ::
2198628    TCGCAGCGCTCCGCCTACGGCGCCTACCTCATGGGCTTTGGAGATGGCTGGCTCAGCTTCAGCG (revcomp)