Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NC_017911.1 strand: - 2197830-2197933 ref: 2197831-2197934

Variable:  NC_017911.1 strand: - 2199245-2199348 alnlen 103 mutations 14 involve-A 13 involve-T 0

AGGTCGCAGCGCTCCGCCAACAACGCCTACAACATGGACTTTGAAGATGGCTGGCTCAACAACAACGACAAGAACAACGAGCGGCTCGCGCGCCCTGTCCGCA (Template)
AGTTCGCAGCGCTCCGCCGACTACGCCTACGGCATGGACTTTGGAGATGGCTGGCTCGACTTCGACGACAAGTTCCTCGAGCGGCTCGCGCGCCCTGTCCGCA (Variable)
Template:  NC_017911.1 strand: - 2197866-2197930 ref: 2197831-2197934

Variable:  NC_017911.1 strand: - 2198564-2198628 alnlen 64 mutations 11 involve-A 11 involve-T 0

TCGCAGCGCTCCGCCAACAACGCCTACAACATGGACTTTGAAGATGGCTGGCTCAACAACAACG (Template)
TCGCAGCGCTCCGCCTACGGCGCCTACCTCATGGGCTTTGGAGATGGCTGGCTCAGCTTCAGCG (Variable)