Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NC_018011.1 strand: + 605431-605542 ref: 605431-605542

Variable:  NC_018011.1 strand: + 604886-604997 alnlen 111 mutations 20 involve-A 20 involve-T 0

GTCCTGTTCAGCGGTAATGCGAATAACAGCTCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATATCAGGTCTCGCCAATGATTT (Template)
GTCCTGTTCGGCGGTGCTGCGCATTACGGCTCGTCTGCCGGTTTTGCGTATGCGAATTCGTCTAACGCGCCCTCGGATACGGTTGCGTTTATCTGGTCTCGCCTTTGCTTT (Variable)
Template:  NC_018011.1 strand: - 1054682-1054851 ref: 1054683-1054851

Variable:  NC_018011.1 strand: - 1056711-1056880 alnlen 169 mutations 10 involve-A 9 involve-T 0

TCCTCTTGCCGGCAACGGTGGCAGCCCGGCTAACGTCAACGGCTATTACTGGTCGGCTACGACCAACAACAACAACAACGCGTTCTACATGAGCGTTACGCCTACCGGTTCATCGGTGACGAACAACAACAAGACGAACTTGTATTCCGTGCGTTGTGTCCGTAGCGTG (Template)
TCCTCTTGCCGGCTACGGTGGCATCCCGGCTAGCGTCAACGGCTATTACTGGTCGGCTACGACCAACAGCAGCAGCACCGCGTTCTACATGAGCGTTACGCCTACCGGTTCATCGGTGACGAACTACGCCAAGACGAACTTGTATTCCGTGCGTTGTGTCCGTAGCGTG (Variable)