Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NZ_AGFD01000005.1 strand: + 21118-21251 ref: 21118-21251

Variable:  NZ_AGFD01000005.1 strand: + 23206-23339 alnlen 133 mutations 23 involve-A 21 involve-T 1

GGTTGGTTTTGGTCGTCTTCGCCCAATGCCAATAATAGTAACCATGCGTGGAACGTGAACTTCAATAACGGTCATGTCAACAATAACAACAAGAACAATACAAACCGGGTGCGTCTCGTTCGCGCGCGAGAGT (Template)
GGTTGGTTTTGGTCGTCTTCGCCCTATGCCAATAATGGTGGCCGTGCGTGGTACGTGTACTTCCATTACGGTCTTGTCAACCACTACTCCAAGGGCTATGCCGTCCGGGTGCGTCTCGTTCGCGCGCGACAGT (Variable)
Template:  NZ_AGFD01000005.1 strand: + 21120-21196 ref: 21118-21251

Variable:  NZ_AGFD01000005.1 strand: + 20313-20389 alnlen 76 mutations 12 involve-A 12 involve-T 0

TTGGTTTTGGTCGTCTTCGCCCAATGCCAATAATAGTAACCATGCGTGGAACGTGAACTTCAATAACGGTCATGTC (Template)
TTGGTTTTGGTCGTCTTCGCCCTATGCCGGTAGTAGTGTCCATGCGTGGCTCGTGGGCTTCAGTAACGGTCGTGTC (Variable)