Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NZ_AHHG01000042.1 strand: - 2513-2667 ref: 2514-2668

Variable:  NZ_AHHG01000042.1 strand: - 3696-3850 alnlen 154 mutations 20 involve-A 19 involve-T 1

CACAGACGGAACGCTAAACAATAGAGGTAACAACGGCAACTATTGGAGTTCTAGTGAAGCTACTTCTAATGCGAACAACCTGAACTTTAATAGCAGTAGTGTAAATGTGAACAATAACAATCGTACGAACGGTTTTTCTGTTCGTTGTGTTGCA (Template)
CACAGACGGAGCGCTAAGCTATAGAGGTTACTTCGGCCTCTATTGGTGTACTAGTGAAGCTACTTCTACTGCGCACTACCTGAGCTTTACTAGCAGTAGTGTAAATGTGTACGATATCTATCGTACGTACGGTTTTTCTGTTCGTTGTGTTGCA (Variable)