Template:  NZ_AJXW01000043.1 strand: - 34053-34181 ref: 34054-34181
Variable:  NZ_AJXW01000043.1 strand: - 34696-34824 alnlen 128 mutations 17 involve-A 16 involve-T 0

34181      AGCGTCGTCCCCCTCGGACTACGCGTGGAACGTCAACTTCAACAACGGCAACGCCAACTACAACCACCAGAACAACAACGGGCGGGTGCGGGCGGTGCGGTCGGTGTCGTCGCCGGCGTCCGGTGAGT (revcomp)
           ::::::::::::::::: :: :::::::  :::: :::::: :: ::::  :::: ::::: ::: ::::  : :: ::::::::::::::::::::::::::::::::::::::::::::::: :::
34824      AGCGTCGTCCCCCTCGGTCTGCGCGTGGGGCGTCGACTTCAGCAGCGGCGGCGCCGACTACGACCGCCAGCCCGACGACGGGCGGGTGCGGGCGGTGCGGTCGGTGTCGTCGCCGGCGTCCGGTCAGT (revcomp)
Template:  NZ_AJXW01000043.1 strand: - 34053-34180 ref: 34054-34181
Variable:  NZ_AJXW01000043.1 strand: - 38118-38245 alnlen 127 mutations 18 involve-A 17 involve-T 0

34180      GCGTCGTCCCCCTCGGACTACGCGTGGAACGTCAACTTCAACAACGGCAACGCCAACTACAACCACCAGAACAACAACGGGCGGGTGCGGGCGGTGCGGTCGGTGTCGTCGCCGGCGTCCGGTGAGT (revcomp)
           :::::::::::::::::::::::::::  ::::  :::: ::  ::::: :::: ::: : ::: ::::  :: :  :::::::::::::::::::::::::::::::::::::::::::::: :::
38245      GCGTCGTCCCCCTCGGACTACGCGTGGCTCGTCTCCTTCTACCTCGGCAGCGCCCACTGCGACCTCCAGGGCAGCGTCGGGCGGGTGCGGGCGGTGCGGTCGGTGTCGTCGCCGGCGTCCGGTCAGT (revcomp)