Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NZ_AMSG01000002.1 strand: + 3965-4032 ref: 3965-4034

Variable:  NZ_AMSG01000002.1 strand: + 3788-3855 alnlen 67 mutations 13 involve-A 13 involve-T 0

TCGGCCTCCAGGTGGTCGTTGAACAACGTCGATAACTGGAACACGAATACGAATTGCAGGTCCCACC (Template)
TCGGCCTCCGGGTGGTCGTTGAGCGGCGTCGTTCTCTGGCCCGCGAATACGTATTGCGGGTCCCGCC (Variable)