Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NZ_CAFN01000268.1 strand: + 4539-4661 ref: 4539-4661

Variable:  NZ_CAFN01000268.1 strand: + 2811-2933 alnlen 122 mutations 16 involve-A 16 involve-T 0

CGAGTGCTGCGCGGCGGTTCGTGGAACAACAATCCAGAAAACTGCCGTTGTGCCTACCGCAACAGGAACGACCCGGACAACCTCAACAACAACAACGGTTTTCGGGTAGCCTGTGCCCCCCC (Template)
CGTGTGCTGCGCGGCGGTTCGTGGCTCAACTATCCAGAGAACTGCCGTTGTGCCTACCGCTACAGGCTCGGCCCGGGCCTCCTCAGCGACTACTACGGTTTTCGGGTAGCCTGTGCCCCCCC (Variable)