Template:  NZ_CAKP01000036.1 strand: + 49803-49914 ref: 49803-49914
Variable:  NZ_CAKP01000036.1 strand: + 49233-49344 alnlen 111 mutations 12 involve-A 12 involve-T 0

49803      TTCCCTCTTCGTGGGGCCAACTGGAACAACGGTGCAAGTGCTGGGGTGTTCGCTTTGAACTTGAACAACCCTCGTTCGAATGCCAACAGCAACATTGGTTTCCGCTCCGCT 
           :::::::::::::::::: :::::  : :::::::::::::::::::::::::::::  :::::::  :::::::::: :::::: : ::::: :::::::::::::::::
49233      TTCCCTCTTCGTGGGGCCCACTGGCTCGACGGTGCAAGTGCTGGGGTGTTCGCTTTGGCCTTGAACCTCCCTCGTTCGCATGCCAGCGGCAACTTTGGTTTCCGCTCCGCT