Template:  NZ_JH376870.1 strand: + 861733-861819 ref: 861733-861819
Variable:  NZ_JH376870.1 strand: + 861145-861231 alnlen 86 mutations 14 involve-A 13 involve-T 0

861733     GCTTCTTACATCCAGTATGTCAACTCCAACGGCAACGTGAACTACAACGACTGTGGTTGGAACGATAGGGGTGTTCGCCCGTTCTG 
           ::::::: : ::: :: ::::  :::: ::::: :::::: ::::  ::::::::::::: ::: :::::::::::::::::: ::
861145     GCTTCTTGCGTCCGGTGTGTCCGCTCCGACGGCTACGTGAGCTACCGCGACTGTGGTTGGGACGTTAGGGGTGTTCGCCCGTTTTG 
Template:  NZ_JH376870.1 strand: + 861733-861819 ref: 861733-861819
Variable:  NZ_JH376870.1 strand: + 841585-841671 alnlen 86 mutations 17 involve-A 15 involve-T 1

861733     GCTTCTTACATCCAGTATGTCAACTCCAACGGCAACGTGAACTACAACGACTGTGGTTGGAACGATAGGGGTGTTCGCCCGTTCTG 
           ::::::  : ::: :: :::: ::::: :::::: ::::  :: :  :: :::::::::: ::::: :::::::::::::::: ::
841585     GCTTCTGGCGTCCGGTGTGTCGACTCCGACGGCAGCGTGGGCTGCGTCGGCTGTGGTTGGTACGATGGGGGTGTTCGCCCGTTTTG