Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  NZ_JH590866.1 strand: - 568436-568529 ref: 568437-568530

Variable:  NZ_JH590866.1 strand: - 566456-566549 alnlen 93 mutations 10 involve-A 9 involve-T 1

GCGTCGAACCGTGCGAACCGTGGTTACAACTCTGCGCGCTACTGGAATTGGAACTCGCAGTCGAACCGCAACGTCAACCTCGGTTTCCGCCCC (Template)
GCGTCGAACCGTGCGTACCGTGGTTACCGCTCTGCGCGCTACTGGACGTGGTACTCGCAGTCGTCCCGCTACGTCACCCTCGGTTTCCGCCCC (Variable)