Template:  NC_005357.1 strand: - 2887-3019 ref: 2887-3020
Variable:  NC_005357.1 strand: - 3443-3575 alnlen 132 mutations 22 involve-A 18 involve-T 1

3019       CGCTGCTGCGCTATTCGGCGGCAACTGGAACAACACGTCGAACTCGGGTTCTCGCGCTGCGAACTGGAACAACGGGCCGTCGAACTCGAACGCGAACATCGGGGCGCGCGGCGTCTGTGCCCATCACCTTCT (revcomp)
           ::::::::::::::::::::::  :::::::  :::::::  :::::::::::::::::::  :::: ::: ::::::::::  ::::  ::::  : ::::::::::::::::::::: ::: :   ::::
3575       CGCTGCTGCGCTATTCGGCGGCGCCTGGAACGGCACGTCGCTCTCGGGTTCTCGCGCTGCGCTCTGGTACAGCGGGCCGTCGTTCTCGTTCGCGTTCTTCGGGGCGCGCGGCGTCTGTGACCACCTGATTCT (revcomp)