myRT


Putative CRISPR-other RTs in complete Genomes

IndexRTmyRTGenomic Neighborhood
1AP008230.1_3182801_3184378_- myRT results RVT-UG7,Cas5_I-B,Cas_Cas7
2CP003532.1_1761548_1762816_- myRT results Cas6,RVT-GII,GIIM
3FP929140.1_1744210_1745499_+ myRT results ABC1_ADCK3,PIN_3,RVT-GII,GIIM,Cas3''_I,DEXHc_cas3,PIN_VapC4-5_FitB-like
4CP002691.1_7799607_7800653_+ myRT results RpoE,RVT-Retrons,cas1,DUF1016_N,YhcG_C
5CP002693.1_69205_70197_+ myRT results Cas1_I-II-III,Cas6b_N,Cas6b_C,RVT-Retrons,Cmr6_III-B
6FR821777.2_72125_73651_+ myRT results cas_csm6,Cas6-I-III,RVT-AbiP2
7CP003345.1_13871_14956_- myRT results Cas2,RVT-UG24
8FR733645.1_415163_416521_+ myRT results Cass2,SLATT_5,RVT-UG17,GlpR,ALDH_F6_MMSDH
9CP003944.1_1025020_1026804_+ myRT results RVT_N,RVT-GII,GIIM,McrA,RVT_N,RVT-GII,GIIM,McrA,Cas10_III
10CP006943.1_1498646_1499863_- myRT results cas1_DVULG,RVT-AbiP2,cas4,Cas7_I-C
11CP008933.1_8445_9932_- myRT results cas7_csf2,RVT-GII,HHA,umuC,PRK10276,RVT-GII
12CP007593.1_1365869_1367791_- myRT results DUF4315,DUF2140,RVT-GII,cas_Csn1,Peptidase_M23,Phage_lysozyme2,PRK08581,VirB4_CagE,TraC-F-type,Peptidase_M23,Phage_lysozyme2,COG3942,RVT-GII,cas_Csn1
13AP014509.1_182702_183733_- myRT results RVT-Retrons,Cas2_I_II_III
14CP007699.2_7613889_7615133_+ myRT results CRISPR_assoc,PRK09694*2,Cas3_C,RVT-AbiP2/RVT-UG13/RVT-UG7/RVT-GII,AbiEii
15FO082060.1_2445982_2447232_- myRT results cas_Cas5d,cas3_GSU0051,Cas3,RVT-GII,GIIM,SpoVK
16CP009515.1_2714070_2714552_- myRT results cas_HTH*2,Cas6b_N,Cas6b_C,RVT-CRISPR,RVT-GII,GIIM,RVT-CRISPR
17CP009515.1_2714605_2715852_- myRT results Cas6b_N,Cas6b_C,RVT-CRISPR,RVT-GII,GIIM,RVT-CRISPR
18CP009515.1_2716356_2717147_- myRT results Cas6b_N,Cas6b_C,RVT-CRISPR,RVT-GII,GIIM,RVT-CRISPR
19CP012024.1_2772858_2774120_- myRT results cas_cas6,RVT-GII,GIIM,BglB
20CP012072.1_1114364_1116142_- myRT results Cas2_I_II_III,RVT-CRISPR/RVT-UG26/RVT-UG7,Cas1_I-II-III
21CP013355.1_579464_580516_+ myRT results Cas6b_C,RVT-Retrons,Cas1_I-II-III,Cas2_I_II_III
22CP015557.1_904279_905952_+ myRT results PrgI,RVT_N,RVT-GII,GIIM,TraC-F-type,PRK06149,Phage_lysozyme2,PRK08581,RVT-GII,cas_Csn1
23CP015500.1_838877_840360_+ myRT results RVT-GII,PinE,SGNH_hydrolase_like_2,cas1_ECOLI,PRK11558,RVT-GII
24CP016534.2_2029608_2030492_- myRT results Cas2,RVT-G2L4,cas_Csn1
25CP017006.1_6765_9521_- myRT results cas_TM1795_cmr1,Cmr3_III-B,Cas_Cmr3,Cas10_III,RVT-DGRs,Cmr6
26CP017761.1_8827_10713_- myRT results cas_Cas5d,Cas3,Cas_Cas4,Csh2,RVT-UG3
27CP021748.1_2942789_2944030_+ myRT results CRISPR_Cse1,PRK09694,Cas3_C,RVT-AbiP2/RVT-UG13/RVT-UG20/RVT-CRISPR,AbiEii
28CP023429.1_2061924_2063411_- myRT results CRISPR_Cas2,cas1_DVULG,RVT-AbiP2,cas4
29CP023969.1_1797919_1799625_+ myRT results CRISPR_Cas2,RVT-Retrons
30CP024507.1_219856_221320_+ myRT results HHA,RVT-GII,INT_Cre_C,cas7_csf2,RVT-GII
31CP028914.1_1343033_1344844_+ myRT results AAA_21,rluA_subfam,RVT_N,RVT-GII,GIIM,HNH,Cas_csx3,TIGR03985
32CP028914.1_3772904_3774661_+ myRT results InsA,RVT_N,RVT-GII,GIIM,McrA,Cas10_III,Cmr3_III-B
33CP029480.1_1326382_1327422_- myRT results Cas2_I_II_III,Cas1_I-II-III,RVT-Retrons,Cas6b_C,cas_TM1807_csm5
34CP031742.1_3602931_3604217_- myRT results RVT-UG23,HD_6,cas3_core,Cas3_C,CRISPR_Cse1
35CP034201.2_54490_55975_+ myRT results cas7_csf2,RVT-GII,PRK10276
36CP035282.1_2041643_2042401_- myRT results cas_Csh2,Cas8a1_I-A,RVT-UG5/RVT-CRISPR/RVT-CRISPR-like,Cas_DxTHG,PRK06526
37CP043056.1_5319227_5320885_+ myRT results DUF4158,DDE_Tnp_Tn3,COG5421,RVT_N,RVT-GII,GIIM,HNH,Cas2_I_II_III,cas1_CYANO
38CP023691.1_1528783_1530027_- myRT results AbiEii,RVT-AbiP2/RVT-UG13/RVT-CRISPR/RVT-UG23,PRK09694*2,Cas3_C,CRISPR_assoc
39CP035534.1_466381_466881_- myRT results Cas6_III,CRISPR_Cas6,group_II_RT_mat,RVT-UG17,PRK08506,LRR_RI
40CP054918.1_1869673_1870911_- myRT results AbiEii,RVT-AbiP2/RVT-UG7/RVT-UG13/RVT-GII,PRK09694*2,Cas3_C,CRISPR_Cse1
41CP054929.1_4696633_4697820_- myRT results AbiEii,RVT-UG7/RVT-CRISPR/RVT-GII/RVT-AbiP2,PRK09694,Cas3_C,CRISPR_Cse1