myRT


Click here to see the genomic neighborhood information for this class (for non-redundant RTs (Similarity < 90%))

Putative UG28 RTs in complete Genomes

IndexRTmyRTGenomic Neighborhood
1CP002205.1_1157548_1159068_+ myRT results DUF4145,RVT-UG28,HigB_toxin
2CP002364.1_220932_222458_+ myRT results HigB,antidote_HigA,RVT-UG28
3CP002745.1_16490_17983_+ myRT results RVT-UG28,Toxin_YhaV,PRK09974
4CP047267.1_5797276_5798772_+ myRT results KOG0713,RVT-UG28
5CP011058.1_624166_625662_+ myRT results SDR_a8,RVT-UG28,UvrD*3,YbjD*2
6FO538765.1_2911519_2913066_- myRT results YD_repeat_2x,RAYT,RVT-UG28,YD_repeat_2x,PRK07075
7CP012044.1_1318779_1320308_- myRT results PinE,AAA_13,RVT-UG28,ACH1,DUF3060
8CP012194.1_3196299_3197861_- myRT results InsE,RVT-UG28,PinE,HTH_ARSR
9CP004046.1_3193051_3194595_- myRT results PHA02517,RVT-UG28,group_II_RT_mat,PinE,HTH_ARSR
10CP004062.1_3184566_3186110_- myRT results PHA02517,RVT-UG28,group_II_RT_mat,PinE,HTH_ARSR
11CP016335.1_3149901_3151463_- myRT results PHA02517,RVT-UG28,PinE,HTH_ARSR
12CP016460.1_1031534_1033102_+ myRT results PRK06416,RVT-UG28,HTH_LUXR,DUF4019,Met_dep_hydrolase_A
13CP024899.1_177653_179230_+ myRT results HTH_17,RVT-UG28,PRK07933
14CP013107.1_2607902_2609410_- myRT results RVT-UG28,INT_C_like_1,YggE
15CP018175.1_3187040_3188602_- myRT results PHA02517,RVT-UG28,PinE,HTH_ARSR
16CP021417.1_58040_59188_+ myRT results Transposase_20,RVT-UG28,CPBP,SseA
17CP022394.1_2701959_2703521_- myRT results PHA02517,RVT-UG28,HTH_7
18AP017557.2_3151388_3152830_- myRT results PHA02517,RVT-UG28,group_II_RT_mat,PinE,HTH_ARSR
19CP023563.1_460261_461793_- myRT results DUF3883,RVT-UG28,DDE_Tnp_1_4,Tra8
20CP031449.2_14959_16461_+ myRT results COG0610,DUF45,RVT-UG28,HTH_Tnp_1,PHA02517,PlsC
21CP023706.1_2299329_2300825_+ myRT results COG4333,PinE,RVT-UG28,HTH_XRE
22CP018321.1_3317367_3318866_- myRT results Beta-lactamase*2,RVT-UG28
23CP024847.1_28445_29383_- myRT results DDE_Tnp_1,DUF4096,RVT-UG28,HTH_XRE
24CP021781.1_1938296_1939795_- myRT results BMFP,pepN,RVT-UG28,PRK10976,PRK03635
25CP030865.1_6710606_6712078_+ myRT results DUF2267,YecE,RVT-UG28,LmbE
26CP012901.1_6958000_6959496_- myRT results PHA02517,HTH_Tnp_1,RVT-UG28,DUF45,COG0610
27CP032762.1_4481312_4482850_+ myRT results SLATT_5,RVT-UG28,AcrR
28CP035226.1_4116866_4118368_- myRT results GIY-YIG_COG3410,DUF2075,NTP-PPase_RS21-C6_like,RVT-UG28,RVT-Retrons
29CP035401.1_4059561_4061063_- myRT results GIY-YIG_COG3410,DUF2075,NTP-PPase_RS21-C6_like,RVT-UG28,RVT-Retrons
30CP035400.1_4059556_4061058_- myRT results GIY-YIG_COG3410,DUF2075,NTP-PPase_RS21-C6_like,RVT-UG28,RVT-Retrons
31CP026159.1_4636062_4637564_- myRT results RVT-UG28,CbtA_toxin,CbeA_antitoxin
32CP035739.1_4083791_4085293_- myRT results PlsC,HTH_Tnp_1,PHA02517,RVT-UG28,DUF45,COG0610
33CP039298.1_4126851_4128350_- myRT results RVT-UG28,PRK09692,SmpB
34CP039964.1_2381943_2383508_- myRT results PRK01889,HTH_19,RVT-UG28,HNH_3
35CP036420.1_737840_739402_- myRT results McrBC,RVT-UG28,Arm-DNA-bind_3
36CP043511.1_4686780_4688285_- myRT results PRK09692,HTH_Tnp_1,rve_3,RVT-UG28,DUF3950,PRK13605
37CP042967.1_3022503_3024004_+ myRT results COG0610,DUF45,RVT-UG28,HTH_Tnp_1,PHA02517,PlsC
38CP046445.1_60223_61728_+ myRT results PRK13605,DUF3950,RVT-UG28,PRK11462,PRK10658
39CP028213.1_3762903_3764405_+ myRT results RVT-Retrons,RVT-UG28,NTP-PPase_RS21-C6_like
40AP022561.1_4654143_4655672_+ myRT results Abhydrolase_6,R_hydratase_like,RVT-UG28,AAA_13
41CP049600.1_1821095_1822639_- myRT results SymE_toxin,HicB,RVT-UG28,PRK11462,PRK10658
42CP049980.1_4422365_4423870_+ myRT results PRK13605,DUF3950,RVT-UG28,PRK11462,PRK10658
43AP022856.1_1686383_1687705_- myRT results PHA02517,RVT-UG28,group_II_RT_mat,PinE,HTH_ARSR
44CP053906.1_4504_6045_- myRT results P63C,RVT-UG28,HTH_XRE,Peptidase_M78
45LR134253.1_1263783_1265282_- myRT results RVT-UG28,PRK09692
46LR134356.1_889877_891406_- myRT results MarR_2,NagC,AAA_13,RVT-UG28,DUF87*2,YjgR,NurA
47LR134475.1_79204_80748_- myRT results SymE_toxin,HicB,RVT-UG28,PRK11462,PRK10658