myRT


Click here to see the genomic neighborhood information for this class (for non-redundant RTs (Similarity < 90%))

Putative UG4 RTs in complete Genomes

IndexRTmyRTGenomic Neighborhood
1CP000096.1_991184_992020_- myRT results ocin_ocin_ocin_TIGR03798*2,RVT-UG4,rSAM_Clo7bot,NHLM_micro_HlyD,type_I_hlyD
2CP000096.1_1002604_1003110_- myRT results ocin_ocin_ocin_TIGR03798,TOMM_pelo,RVT-UG4,HTH_57,antibiot_sagB,mthyl_mthyl_mthyl_TIGR00027
3CP000437.1_638723_638950_- myRT results RVT-UG4,DsbB
4CP000510.1_1476991_1477275_- myRT results PHA02517,RVT-UG4,nadD
5CP000826.1_4593443_4594420_- myRT results RVT-UG4,FimA,PRK15276
6CP000915.1_671064_671291_- myRT results RVT-UG4,DsbB,SufE
7CP001028.1_132871_133701_+ myRT results PRK09926,FimD,RVT-UG4,FimA,Tra8
8CP001633.1_1393624_1393851_+ myRT results DsbB,RVT-UG4
9AP011177.1_3217718_3219202_+ myRT results InsA,DDE_Tnp_IS1595,PRK10902,RVT-UG4*2,DUF823,Big_1
10CP003740.1_1296700_1297665_+ myRT results proteasome_beta,RVT-UG4
11CP003740.1_3201833_3202822_- myRT results HYR,Big_6,RVT-UG4,DDE_Tnp_1_4,ResIII
12CP003742.1_4621630_4622688_+ myRT results DDE_Tnp_IS66,Tra8,RVT-UG4,DUF4198*2,Exop_C*4,fn3,Invasin_D3,IS285
13CP003862.1_637014_637241_- myRT results RVT-UG4,DsbB
14CP006250.1_1332930_1333916_+ myRT results PRK15287,PRK15288,RVT-UG4
15CP002557.1_200836_201867_+ myRT results PRK05756,DUF3568,RVT-UG4,DUF3281,MoxR
16CP002558.1_709310_709756_- myRT results LptD,PKD_3*3,PKD,RVT-UG4,DUF2797,FUSC
17CP002910.1_4229834_4231912_- myRT results PRK09692,Integrase_1,RVT-UG4,FimD,FimC
18CP015613.1_1190223_1191200_+ myRT results PRK15287,PRK15260,RVT-UG4
19CP015613.1_1221944_1222909_+ myRT results PRK15287,FimA,RVT-UG4
20CP003735.1_2030427_2031482_+ myRT results TnpB_IS66,RVT-UG4,COG4446
21CP003735.1_2152349_2152675_+ myRT results UbiE,LysR,RVT-UG4,NIPSNAP
22CP003735.1_3534469_3535509_- myRT results RVT-UG4,COG1033,LolA_like
23CP003932.1_633039_633266_- myRT results RVT-UG4,DsbB,SufE
24CP003959.1_122890_123552_+ myRT results PRK15287,FimA,RVT-UG4,COG3943
25CP005966.1_479231_480154_- myRT results FimA,RVT-UG4,FimA,PRK15285
26CP006566.1_1423549_1424514_+ myRT results PRK15287,PRK15288,RVT-UG4
27CP006648.1_3652494_3654527_- myRT results RVT-UG4,FimD,FimC
28CP019190.1_104251_104943_- myRT results RVT-UG4,rve_2,RelE,IAT_beta,Big_1,Invasin_D3,Big_1*7
29CP019190.1_108573_109178_+ myRT results COG3547,RVT-UG4,IAT_beta,Big_1,Invasin_D3,Big_1*6,CaiF_GrlA
30CP019190.1_136917_137525_+ myRT results HTH_23,InsE,RVT-UG4,IAT_beta,Big_1,Invasin_D3,Big_1*7
31CP006580.1_34213_36348_- myRT results Smc*2,RVT-UG4,FimC,FimD
32CP006798.1_4344016_4346097_+ myRT results FimC,FimD,RVT-UG4
33CP009208.1_4173071_4175152_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
34CP008929.1_950523_952604_- myRT results YqgA,PRK09692,RVT-UG4,FimD,FimC
35CP006738.1_714283_716307_+ myRT results FimD,RVT-UG4,EAL,INT_P4_C
36CP006722.1_732277_734349_+ myRT results FimD,RVT-UG4,PRK09692,YqgA
37CP009444.1_904150_904791_+ myRT results HprK_C,HTH_38,rve,RVT-UG4
38CP009607.1_143424_144458_+ myRT results FUSC,DUF2797,RVT-UG4,PKD_3,Ig1_Contactin-2,PKD_3,Ig1_Contactin-2,PKD,LptD
39CP009607.1_680686_681717_- myRT results MoxR,DUF3281,RVT-UG4,DUF3568,PRK05756
40CP011254.1_843402_844376_- myRT results BcsQ,RVT-UG4,FimA,PRK15287
41CP011254.1_2452893_2453879_- myRT results RVT-UG4,FimA,PRK15287
42CP012753.1_4398137_4400218_+ myRT results FimC,FimD,RVT-UG4
43CP013047.2_47924_48835_- myRT results HTH_LUXR,RVT-UG4,PRK15260,PRK15287
44CP013046.2_1034472_1035437_+ myRT results PRK15287,PRK15288,RVT-UG4,RfaL
45CP013046.2_4640878_4641987_+ myRT results SpoVK,Adeno_shaft*2,Invasin_D3,RVT-UG4,IAT_beta,Invasin_D3*18,PRK15386
46CP013914.1_88172_89143_- myRT results RVT-UG4,FimA,PRK15287
47CP013965.1_4673737_4674713_+ myRT results PRK15285,FimA,RVT-UG4,FimA
48CP014004.1_4400661_4402742_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
49CP014017.2_1422868_1423890_- myRT results heptsyl_trn_III,RVT-UG4,FimA,PRK15287
50CP014017.2_3437352_3438272_+ myRT results FimD,FimA,RVT-UG4,SMC_prok_A,PRK10902
51CP016948.1_282856_283836_+ myRT results PRK15287,PRK15288,RVT-UG4
52CP012096.1_861171_862136_- myRT results RVT-UG4,PRK15288,PRK15287
53CP012097.1_1443062_1444027_+ myRT results PRK15287,PRK15288,RVT-UG4
54CP015990.1_802321_804402_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
55CP016032.1_923625_924602_+ myRT results PRK15287,PRK15288,RVT-UG4,RfaL
56CP016392.1_4536261_4537237_+ myRT results PRK15285,FimA,RVT-UG4,FimA
57CP016923.1_1159229_1161310_- myRT results YqgA,PRK09692,RVT-UG4,FimD,FimC
58CP016926.1_3395735_3397816_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
59CP017385.1_4557487_4559568_- myRT results YqgA,PRK09692,RVT-UG4,FimD,FimC
60CP017599.1_3963675_3964046_+ myRT results RVT-UG4*2,DUF4157
61CP017599.1_3964096_3964632_+ myRT results RVT-UG4*2,DUF4157,KOG0736,SpoVK
62CP014944.1_586062_586613_- myRT results PEP-CTERM,RVT-UG4,RAYT
63CP014944.1_2933778_2934797_- myRT results PEP-CTERM,RVT-UG4,PKD*3,DUF1566*2
64CP009654.1_458674_459009_- myRT results PRK05580,RVT-UG4*2,HprK_C
65CP009654.1_459022_459372_- myRT results RVT-UG4*2,HprK_C,ATPgrasp_ST*2
66CP009682.1_1083017_1083580_+ myRT results DUF2797,PKD*16,RVT-UG4,LptD
67CP018458.1_826676_828757_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
68CP019450.1_613376_613792_+ myRT results DUF1554,RVT-UG4,Endostatin,gyrB
69CP019450.1_2808188_2808760_+ myRT results DUF3267,RVT-UG4,DUF1554,VOC
70CP019450.1_3485224_3486252_- myRT results KOG3544,Endostatin-like,RVT-UG4,KOG1638,YdiL
71CP019947.1_4012227_4012520_+ myRT results TolC,TPR*3,Sulfotransfer_3,TPR,RVT-UG4,Cadherin_repeat*8,Big_5,PRK03846
72CP020067.1_3135867_3137948_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
73CP048229.1_637018_637245_- myRT results PRK09194,RVT-UG4,DsbB,SufE
74CP048229.1_1304533_1304965_+ myRT results DUF2797,RVT-UG4
75CP015120.1_715960_717990_+ myRT results FimC,FimD,RVT-UG4,EAL,INT_P4_C
76CP020853.1_4903886_4905967_- myRT results PRK09692,Integrase_1,RVT-UG4,FimD,FimC
77CP021708.1_4931888_4933969_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
78CP018836.1_84619_85686_+ myRT results VI_chp_8,RVT-UG4,RimL
79CP022015.1_3866612_3867616_- myRT results RVT-UG4,SCPU,FimA
80CP022023.1_990617_992695_- myRT results INT_P4_C,Integrase_1,RVT-UG4,FimD,FimC
81CP022127.1_3277961_3280042_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
82CP018927.1_271400_272377_+ myRT results PRK15287,PRK15288,RVT-UG4
83CP018917.1_290319_291293_- myRT results InsE,RVT-UG4
84CP023818.1_1465011_1465982_+ myRT results PRK15285,FimA,RVT-UG4,CwlO1
85CP023956.1_1227598_1228545_- myRT results RVT-UG4,FimA,PRK15287
86CP023956.1_1582852_1583814_- myRT results Autoind_bind,LuxR_C_like,RVT-UG4,FimA,PRK15287
87CP018056.1_4559141_4561222_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
88CP023345.1_3562050_3562778_- myRT results PRK15471,autotrans_barl,RVT-UG4,PerC,CaiF_GrlA
89CP025757.1_4592747_4593853_- myRT results RVT-UG4,Wzy_C,Wzy_C_2,PRK10902
90CP025778.1_636798_637025_- myRT results RVT-UG4,DsbB,SufE
91CP026586.1_715802_717832_+ myRT results FimC,FimD,RVT-UG4,EAL
92CP026751.1_3883113_3885194_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
93CP021490.1_667715_667942_- myRT results RVT-UG4,DsbB,COG3676*2
94CP028176.1_3094888_3096969_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
95CP024874.1_4889487_4891568_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
96CP028521.1_97948_98934_+ myRT results InsQ,PRK15276,PRK15287,RVT-UG4
97CP028716.1_5198258_5200336_- myRT results INT_P4_C,Integrase_1,RVT-UG4,FimD,FimC
98CP028932.1_2098729_2100810_- myRT results PRK09692,Integrase_1,RVT-UG4,FimD,FimC
99CP029137.1_1043497_1045575_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
100CP022611.1_3964877_3966958_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
101CP030785.2_71461_72468_- myRT results RVT-UG4,PRK15211
102CP029989.1_851198_851926_+ myRT results CaiF_GrlA,PerC,RVT-UG4,autotrans_barl,PRK15471
103CP030180.1_649123_650100_+ myRT results FimC,PRK15223,RVT-UG4
104CP030180.1_880220_880948_+ myRT results CaiF_GrlA,PerC,RVT-UG4,autotrans_barl,PRK15471
105CP030219.1_467738_468712_+ myRT results FimC,PRK15223,RVT-UG4
106CP030219.1_843990_844964_+ myRT results FimC,PRK15223,RVT-UG4
107CP030219.1_2008160_2009134_+ myRT results FimC,PRK15223,RVT-UG4
108CP030923.1_2102375_2104456_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
109CP031316.1_929565_930521_+ myRT results PRK15287,PRK15288,RVT-UG4
110CP031734.1_664191_666272_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
111CP031810.1_4752639_4754669_+ myRT results FimC,FimD,RVT-UG4,EAL
112CP016989.1_4743703_4744679_+ myRT results PRK15285,FimA,RVT-UG4,FimA
113CP032296.1_3915061_3917412_- myRT results MipA,PRK10902,RVT-UG4,FimC,FimD
114AP018747.1_412698_414779_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
115AP018750.1_412716_414797_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
116AP018753.1_412716_414797_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
117CP033055.1_4213413_4213850_- myRT results PBP2_DppA_like,HTH_LUXR,RVT-UG4,FimA,PRK15287
118CP033055.1_4716999_4717964_+ myRT results PRK15287,FimA,RVT-UG4,PRK15302
119CP033162.1_4536884_4537876_- myRT results RVT-UG4,FimA,PRK15276
120CP033777.1_1395947_1397977_+ myRT results FimC,FimD,RVT-UG4,EAL
121CP027740.1_4227806_4228654_- myRT results CitB,IS5,RVT-UG4,PRK15288,PRK15287
122CP034045.1_773614_775695_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
123CP034053.1_772532_774613_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
124CP034076.1_780756_782837_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
125CP034077.1_780756_782837_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
126CP024707.1_793102_795183_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
127CP040805.1_981677_982789_- myRT results PRK09692,IAT_beta,PRK15318,Invasin_D3*6,RVT-UG4,HTH_18,SbmC,PRK09230
128CP034466.1_470405_470632_- myRT results PRK09194,RVT-UG4,DsbB,SufE
129CP034466.1_1138532_1138964_+ myRT results DUF2797,RVT-UG4
130CP034467.1_421989_422216_+ myRT results SufE,DsbB,RVT-UG4,PRK09194
131CP034467.1_1647795_1648227_- myRT results RVT-UG4,DUF2797
132CP034468.1_328897_329329_- myRT results RVT-UG4,DUF2797
133CP034468.1_996833_997060_+ myRT results SufE,DsbB,RVT-UG4,PRK09194
134AP019009.1_654041_655237_- myRT results INT_FimBE_like,LysM,IAT_beta,Invasin_D3*8,RVT-UG4,CaiF_GrlA
135CP025684.1_733714_735798_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
136CP027218.1_3899664_3899963_- myRT results KOG1918,BID_2,RVT-UG4,PBP2_PotF,agmatine_aguA
137CP034408.1_2794984_2797065_- myRT results PRK09692,Integrase_1,RVT-UG4,PapC_N,FimC
138CP036187.1_1415431_1417511_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
139CP035929.1_829524_831605_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
140CP036335.1_4810456_4812536_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
141CP036490.1_2154649_2156826_- myRT results MipA,PRK10902,RVT-UG4,FimC,FimD
142CP034778.1_705271_707301_+ myRT results FimC,FimD,RVT-UG4,EAL
143CP038467.1_2054363_2055340_- myRT results RfaL,RVT-UG4,PRK15288,PRK15287
144CP038662.1_960595_961416_+ myRT results PRK15287,PRK15288,RVT-UG4,RfaL
145CP040593.1_2431328_2433409_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
146CP040993.1_500049_502130_- myRT results PRK09692,Integrase_1,RVT-UG4,FimD,FimC
147CP041125.1_1207268_1208314_+ myRT results PRK15287,PRK15288,RVT-UG4
148CP041130.1_1206909_1207955_+ myRT results PRK15287,PRK15288,RVT-UG4
149CP041131.1_957907_958905_+ myRT results PRK15287,FimA,RVT-UG4,SWIM
150CP041134.1_1206877_1207923_+ myRT results PRK15287,PRK15288,RVT-UG4
151CP041123.1_1207232_1208278_+ myRT results PRK15287,PRK15288,RVT-UG4
152CP033894.1_86161_86721_- myRT results PRK15219,RVT-UG4,COG3464,COG4584,DDE_Tnp_ISL3,Zn_Tnp_IS91,Y2_Tnp
153CP033894.1_152697_153701_- myRT results RVT-UG4,FimD
154CP041233.1_89951_90937_+ myRT results PRK15287,FimA,RVT-UG4
155CP036298.1_1099338_1100183_- myRT results RVT-UG4,Sig-70_plancto1,Dockerin_1*2
156CP030072.1_4519817_4521898_- myRT results PRK09692,Integrase_1,RVT-UG4,FimD,FimC
157CP045351.1_21841_23028_+ myRT results PRK11235,HAD_like,RVT-UG4,rve_2
158CP045661.1_728098_730128_+ myRT results FimC,FimD,RVT-UG4,EAL
159CP045913.1_747280_748257_- myRT results LZ_Tnp_IS66,zf-IS66,DDE_Tnp_IS66,DDE_Tnp_IS66_C*2,RVT-UG4,PRK15260,PRK15287
160CP033106.1_3663366_3664355_- myRT results RVT-UG4,FimA,PRK15287
161CP046381.1_789324_791405_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
162CP044380.1_4558226_4560306_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
163CP046804.1_923799_924785_+ myRT results PRK15274,FimA,RVT-UG4
164CP046949.1_789325_791406_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
165CP046939.1_789325_791406_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
166CP033623.1_524542_525588_+ myRT results PRK15287,PRK15288,RVT-UG4
167CP045674.1_792870_794111_+ myRT results FimC,FimD,RVT-UG4,Integrase_1
168CP041414.1_52632_53585_+ myRT results RVT-UG4,FaeA
169CP044002.1_135410_135842_+ myRT results DUF2797,RVT-UG4
170CP044002.1_1359918_1360145_- myRT results PRK09194,RVT-UG4,DsbB,SufE
171CP044003.1_135409_135841_+ myRT results DUF2797,RVT-UG4
172CP044003.1_1359916_1360143_- myRT results PRK09194,RVT-UG4,DsbB,SufE
173CP044004.1_135448_135880_+ myRT results DUF2797,RVT-UG4
174CP044004.1_1360380_1360607_- myRT results PRK09194,RVT-UG4,DsbB,SufE
175CP044005.1_135430_135862_+ myRT results DUF2797,RVT-UG4
176CP044005.1_1360088_1360315_- myRT results PRK09194,RVT-UG4,DsbB,SufE
177CP048621.1_884376_885145_- myRT results RVT-UG4,RhsA
178CP048796.1_3561853_3562764_- myRT results PHA02517,RVT-UG4,FimA,PRK15276
179CP050012.1_4714829_4715805_+ myRT results PRK15285,FimA,RVT-UG4
180CP050013.1_1016113_1017090_+ myRT results PRK15287,PRK15288,RVT-UG4
181CP050171.1_1616467_1617273_+ myRT results FimA,RVT-UG4,PRK09959,PRK09958
182CP050171.1_3629034_3629888_+ myRT results PRK15287,FimA,RVT-UG4,Tra5
183CP053771.1_3896826_3898907_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
184CP053765.1_749038_751119_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
185CP058798.1_749149_751230_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
186CP050376.1_4665461_4667542_- myRT results PRK09692,Integrase_1,RVT-UG4,FimD,FimC
187CP050447.1_3779873_3780793_+ myRT results PRK15287,PRK15288,RVT-UG4,Tra8
188CP050813.1_19031_19982_- myRT results Rve,RVT-UG4,PRK15211*2,PRK15213*2
189CP050834.1_4692934_4694964_- myRT results EAL,RVT-UG4,FimD,FimC
190CP042977.1_714789_716819_+ myRT results FimC,FimD,RVT-UG4,EAL
191CP038017.1_1300896_1301849_+ myRT results RVT-UG4,DUF3281,Ere-like
192CP038241.1_341626_342591_+ myRT results HprK_C,RVT-UG4
193CP053286.1_4553004_4553513_- myRT results PRK09183,InsE*2,RVT-UG4,LZ_Tnp_IS66,zf-IS66,DDE_Tnp_IS66,DDE_Tnp_IS66_C,TnpB_IS66
194CP053286.1_5077444_5078430_- myRT results RVT-UG4,FimA*2
195CP042882.1_721186_723267_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
196CP054160.1_4714933_4715808_- myRT results RVT-UG4,FimA,PRK15287
197CP054160.1_5051410_5052090_- myRT results Autoind_bind,RVT-UG4*2,FimA
198CP054160.1_5053137_5054132_- myRT results RVT-UG4*2,FimA,PRK15287
199CP040350.1_4407191_4408153_- myRT results RVT-UG4,FimA,PRK15287
200CP045667.1_46558_47451_- myRT results RVT-UG4,FimD,FimC
201CP059889.1_783657_785738_+ myRT results FimC,FimD,RVT-UG4,Integrase_1,PRK09692
202AP022139.1_771445_773526_+ myRT results FimC,FimD,RVT-UG4,PRK09692,YqgA
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219LR134494.1_1400758_1401735_+ myRT results PRK15287,PRK15288,RVT-UG4
220LR134494.1_4516125_4516955_- myRT results RVT-UG4,FimA,PRK15287
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224LR745042.1_715243_717273_+ myRT results FimC,FimD,RVT-UG4,EAL
225LR745045.1_715806_717836_+ myRT results FimC,FimD,RVT-UG4,EAL
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227LR778144.1_3371325_3372062_+ myRT results PRK10954,RVT-UG4
228LR778144.1_3393328_3394386_- myRT results HsdM_N,RVT-UG4,YeeP