myRT

myRT report for GCA_000006965.1_ASM696v1

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Seq: AE006469.1 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence (1354226 bp)
Overview 1 RT 1: 1019529-1026050 bp 2 RT 2: 1063481-1069086 bp Neighborhood of RT #1 [1019529, 1026050] Kup COG3335 RVT-GII GIIM COG3415 Neighborhood of RT #2 [1063481, 1069151] IlvA INT_RitA_C_like RVT-GII GIIM IS285 SoxE Feature: gene Location: 1019529-1021430 bp Ori: AAK65649.1 Gene: kup2 Feature: domain Description: Kup Location: 1019568-1021428 bp Feature: domain Description: Kup Location: 1 01 9568-1 021 428 bp Feature: gene Location: 1022070-1022585 bp Ori: AAK65650.2 Feature: domain Description: COG3335 Location: 1022190-1022574 bp Feature: domain Description: COG3335 Location: 1 0221 90-1 022574 bp Feature: gene Location: 1022639-1023898 bp Ori: AAK65651.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1022855-1023509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 022855-1 023509 bp Feature: domain Description: GIIM Note: maturase Location: 1023590-1023812 bp Feature: domain Description: GIIM Note: maturase Location: 1 023590-1 02381 2 bp Feature: gene Location: 1024493-1024900 bp Ori: AAK65652.1 Feature: domain Description: COG3415 Location: 1024496-1024898 bp Feature: domain Description: COG341 5 Location: 1 024496-1 024898 bp Feature: gene Location: 1025646-1026050 bp Feature: gene Location: 1063481-1064452 bp Ori: AAK65688.1 Feature: domain Description: IlvA Location: 1063493-1064438 bp Feature: domain Description: IlvA Location: 1 063493-1 064438 bp Feature: gene Location: 1064742-1065083 bp Ori: AAK65689.1 Feature: domain Description: INT_RitA_C_like Location: 1064745-1065066 bp Feature: domain Description: INT_RitA_C_like Location: 1 064745-1 065066 bp Feature: gene Location: 1065694-1067211 bp Ori: AAK65690.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1065997-1066759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 065997-1 066759 bp Feature: domain Description: GIIM Note: maturase Location: 1066828-1067098 bp Feature: domain Description: GIIM Note: maturase Location: 1 066828-1 067098 bp Feature: gene Location: 1067876-1068031 bp Ori: AAK65691.1 Feature: domain Description: IS285 Location: 1067879-1068023 bp Feature: domain Description: IS285 Location: 1 067879-1 068023 bp Feature: gene Location: 1068558-1069151 bp Ori: AAK65692.1 Feature: domain Description: SoxE Location: 1068750-1069086 bp Feature: domain Description: SoxE Location: 1 068750-1 069086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Kup (COG3158), COG3335 (Transposase ), RVT-GII, GIIM (pfam08388), COG3415 (Transposase ), IlvA (COG1171), INT_RitA_C_like (cd01188), IS285 (COG3328), SoxE (pfam06525)

Seq: AL591985.1 Sinorhizobium meliloti 1021 plasmid pSymB (1683333 bp)
Overview 1 RT 1: 674574-677820 bp 2 RT 2: 910662-916711 bp 3 RT 3: 1400396-1403329 bp 4 RT 4: 1574126-1576621 bp Neighborhood of RT #1 [674574, 677840] COG3415 RVT-GII GIIM DDE_3 acpP Neighborhood of RT #2 [910662, 916827] hutH PRK09356 RVT-GII GIIM AraJ HTH_ARSR Neighborhood of RT #3 [1400396, 1403329] MazF MazF RVT-GII GIIM Neighborhood of RT #4 [1574126, 1576621] COG3335 RVT-GII GIIM Feature: gene Location: 674574-674957 bp Ori: CAC49022.2 Gene: TRm10-1a Feature: domain Description: COG3415 Location: 674580-674928 bp Feature: domain Description: COG3415 Location: 674580-67492 8 bp Feature: gene Location: 674930-675061 bp Feature: gene Location: 675573-676832 bp Ori: CAC49024.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675789-676443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675789-676443 bp Feature: domain Description: GIIM Note: maturase Location: 676524-676746 bp Feature: domain Description: GIIM Note: maturase Location: 67652 4-676746 bp Feature: gene Location: 676928-677401 bp Ori: CAC49025.2 Gene: TRm10-1b-2 Feature: domain Description: DDE_3 Location: 676937-677315 bp Feature: domain Description: DDE_3 Location: 676937-677315 bp Feature: gene Location: 677565-677840 bp Ori: CAQ51288.1 Feature: domain Description: acpP Location: 677607-677820 bp Feature: domain Description: acpP Location: 677607-67782 0 bp Feature: gene Location: 910662-912197 bp Ori: CAC49231.1 Gene: hutH1 Feature: domain Description: hutH Location: 910671-912186 bp Feature: domain Description: hutH Location: 910671-912 186 bp Feature: gene Location: 912194-913609 bp Ori: CAC49232.1 Gene: hutI Feature: domain Description: PRK09356 Location: 912398-913601 bp Feature: domain Description: PRK09356 Location: 912 398-913601 bp Feature: gene Location: 913644-915005 bp Ori: CAC49233.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913971-914586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913971-914586 bp Feature: domain Description: GIIM Note: maturase Location: 914643-914856 bp Feature: domain Description: GIIM Note: maturase Location: 914643-914856 bp Feature: gene Location: 915182-916366 bp Ori: CAC49234.1 Feature: domain Description: AraJ Location: 915185-916343 bp Feature: domain Description: AraJ Location: 915185-916343 bp Feature: gene Location: 916402-916827 bp Ori: CAC49235.1 Feature: domain Description: HTH_ARSR Location: 916513-916711 bp Feature: domain Description: HTH_ARSR Location: 916513-916711 bp Feature: gene Location: 1400396-1400599 bp Ori: CAC49701.1 Feature: domain Description: MazF Location: 1400399-1400510 bp Feature: domain Description: MazF Location: 1400399-1400510 bp Feature: gene Location: 1400599-1400946 bp Ori: CAC49702.1 Feature: domain Description: MazF Location: 1400602-1400935 bp Feature: domain Description: MazF Location: 1400602 -1400935 bp Feature: gene Location: 1400899-1402077 bp Ori: CAC49703.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1401043-1401658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1401043-1401658 bp Feature: domain Description: GIIM Note: maturase Location: 1401715-1401928 bp Feature: domain Description: GIIM Note: maturase Location: 1401715-140192 8 bp Feature: gene Location: 1402093-1402710 bp Feature: gene Location: 1403027-1403329 bp Feature: gene Location: 1574126-1574641 bp Ori: CAC49870.2 Gene: TRm2011-2b-2 Feature: domain Description: COG3335 Location: 1574246-1574630 bp Feature: domain Description: COG3335 Location: 15742 46-1574630 bp Feature: gene Location: 1574366-1574797 bp Feature: gene Location: 1574695-1575954 bp Ori: CAC49872.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1574911-1575565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1574911-1575565 bp Feature: domain Description: GIIM Note: maturase Location: 1575646-1575868 bp Feature: domain Description: GIIM Note: maturase Location: 1575646-1575868 bp Feature: gene Location: 1576466-1576606 bp Feature: gene Location: 1576484-1576621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358), acpP (PRK00982), hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), AraJ (COG2814), HTH_ARSR (smart00418), MazF (COG2337)
COG3335 (Transposase )