myRT

myRT report for GCA_000009785.1_ASM978v1

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Seq: BA000043.1 Geobacillus kaustophilus HTA426 DNA, complete genome (3544776 bp)
Overview 1 RT 1: 1311044-1319108 bp 2 RT 2: 1373753-1377446 bp 3 RT 3: 1493524-1499191 bp Neighborhood of RT #1 [1311044, 1319119] PRK00549 recA RVT-GII HNHc RNase_Y YmdB Neighborhood of RT #2 [1373753, 1377446] DUF2564 RVT-GII GIIM CspC Neighborhood of RT #3 [1493524, 1499223] COG2905 PRK07740 RVT-GII GIIM PCYCGC FhuD Feature: gene Location: 1311044-1312288 bp Ori: BAD75579.1 Gene: GK1294 Feature: domain Description: PRK00549 Location: 1311050-1312277 bp Feature: domain Description: PRK00549 Location: 1 31 1 050-1 31 2277 bp Feature: gene Location: 1312466-1312771 bp Ori: BAD75580.1 Gene: GK1295 Feature: domain Description: recA Location: 1312472-1312757 bp Feature: domain Description: recA Location: 1 31 2472-1 31 2757 bp Feature: gene Location: 1313922-1315403 bp Ori: BAD75581.1 Gene: GK1296 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1313925-1314555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 3925-1 31 4555 bp Feature: domain Description: HNHc Note: nucleases Location: 1315152-1315317 bp Feature: domain Description: HNHc Note: nucleases Location: 1 31 51 52-1 31 531 7 bp Feature: gene Location: 1316667-1318223 bp Ori: BAD75582.1 Gene: GK1297 Feature: domain Description: RNase_Y Location: 1316685-1318221 bp Feature: domain Description: RNase_Y Location: 1 31 6685-1 31 8221 bp Feature: gene Location: 1318325-1319119 bp Ori: BAD75583.1 Gene: GK1298 Feature: domain Description: YmdB Location: 1318328-1319108 bp Feature: domain Description: YmdB Location: 1 31 8328-1 31 91 08 bp Feature: gene Location: 1373753-1373962 bp Feature: gene Location: 1374330-1374599 bp Ori: BAD75639.1 Gene: GK1354 Feature: domain Description: DUF2564 Location: 1374363-1374597 bp Feature: domain Description: DUF2564 Location: 1 374363-1 374597 bp Feature: gene Location: 1375247-1376506 bp Ori: BAD75640.1 Gene: GK1355 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375445-1376063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 375445-1 376063 bp Feature: domain Description: GIIM Note: maturase Location: 1376111-1376324 bp Feature: domain Description: GIIM Note: maturase Location: 1 3761 1 1 -1 376324 bp Feature: gene Location: 1376616-1376816 bp Ori: BAD75641.1 Gene: GK1356 Feature: domain Description: CspC Location: 1376619-1376811 bp Feature: domain Description: CspC Location: 1 37661 9-1 37681 1 bp Feature: gene Location: 1377180-1377446 bp Feature: gene Location: 1493524-1494576 bp Ori: BAD75738.1 Gene: GK1453 Feature: domain Description: COG2905 Location: 1493551-1494559 bp Feature: domain Description: COG2905 Location: 1 493551 -1 494559 bp Feature: gene Location: 1494569-1495297 bp Ori: BAD75739.1 Gene: GK1454 Feature: domain Description: PRK07740 Location: 1494578-1495295 bp Feature: domain Description: PRK07740 Location: 1 494578-1 495295 bp Feature: gene Location: 1496009-1497106 bp Ori: BAD75740.1 Gene: GK1455 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1496207-1496825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 496207-1 496825 bp Feature: domain Description: GIIM Note: maturase Location: 1496873-1497050 bp Feature: domain Description: GIIM Note: maturase Location: 1 496873-1 497050 bp Feature: gene Location: 1497403-1497834 bp Ori: BAD75741.1 Gene: GK1456 Feature: domain Description: PCYCGC Location: 1497436-1497721 bp Feature: domain Description: PCYCGC Location: 1 497436-1 497721 bp Feature: gene Location: 1498255-1499223 bp Ori: BAD75742.1 Gene: GK1457 Feature: domain Description: FhuD Location: 1498426-1499191 bp Feature: domain Description: FhuD Location: 1 498426-1 4991 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00549 (competence damage-inducible protein A; Provisional), recA (PRK09519), RVT-GII, HNHc (smart00507), RNase_Y (TIGR03319), YmdB (pfam13277), DUF2564 (pfam10819), GIIM (pfam08388), CspC (COG1278), COG2905 (Signal-transduction protein containing cAMP-binding, CBS, and nucleotidyltransferase domains )
PRK07740 (hypothetical protein; Provisional), PCYCGC (pfam13798), FhuD (cd01146)