myRT

myRT report for GCA_000009925.1_ASM992v1

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Seq: AP006841.1 Bacteroides fragilis YCH46 DNA, complete genome (5277274 bp)
Overview 1 RT 1: 1247917-1256875 bp 2 RT 2: 4861328-4865865 bp Neighborhood of RT #1 [1247917, 1256883] GlnA3 RVT-Retrons rpsA RNase_Z Neighborhood of RT #2 [4861328, 4865865] NHL 7WD40 RVT_N RVT-GII RVT-GII HTH_28 Feature: gene Location: 1247917-1250106 bp Ori: BAD47790.1 Feature: domain Description: GlnA3 Location: 1247992-1250104 bp Feature: domain Description: GlnA3 Location: 1 247992-1 2501 04 bp Feature: gene Location: 1250346-1252565 bp Feature: gene Location: 1252772-1253884 bp Ori: BAD47792.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1253087-1253636 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 253087-1 253636 bp Feature: gene Location: 1254026-1255819 bp Ori: BAD47793.1 Feature: domain Description: rpsA Location: 1254104-1255712 bp Feature: domain Description: rpsA Location: 1 2541 04-1 25571 2 bp Feature: gene Location: 1255969-1256883 bp Ori: BAD47794.1 Feature: domain Description: RNase_Z Location: 1255984-1256875 bp Feature: domain Description: RNase_Z Location: 1 255984-1 256875 bp Feature: gene Location: 4861328-4862695 bp Feature: gene Location: 4862692-4863747 bp Ori: BAD51000.1 Feature: domain Description: NHL Location: 4862914-4863280 bp Feature: domain Description: NHL Location: 486291 4-4863280 bp Feature: domain Description: 7WD40 Location: 4863331-4863712 bp Feature: domain Description: 7WD40 Location: 4863331 -486371 2 bp Feature: gene Location: 4864597-4864947 bp Ori: BAD51001.1 Feature: domain Description: RVT_N Location: 4864600-4864798 bp Feature: domain Description: RVT_N Location: 4864600-4864798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4864852-4864921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4864852-4864921 bp Feature: gene Location: 4864925-4865122 bp Ori: BAD51002.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4864928-4865120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4864928-48651 20 bp Feature: gene Location: 4865243-4865533 bp Ori: BAD51003.1 Feature: domain Description: HTH_28 Location: 4865267-4865414 bp Feature: domain Description: HTH_28 Location: 4865267-486541 4 bp Feature: gene Location: 4865677-4865865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651), NHL (pfam01436), 7WD40 (sd00039), RVT_N (pfam13655), RVT-GII, HTH_28 (pfam13518)