myRT

myRT report for GCA_000010265.1_ASM1026v1

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Seq: AP009049.1 (3896121 bp)
Overview 1 RT 1: 30542-36546 bp 2 RT 2: 558682-563942 bp 3 RT 3: 2961919-2966335 bp 4 RT 4: 3885351-3891978 bp Neighborhood of RT #1 [30542, 36546] Lactamase_B OrfB_Zn_ribbon RVT-GII GIIM PRK13169 Neighborhood of RT #2 [558682, 563986] Glyoxalase_2 RVT-GII HNHc STE14 BaeS PG_binding_1 PG_binding_1 Neighborhood of RT #3 [2961919, 2966335] ABC_trans_CmpB RVT-GII GIIM Ferritin_like_AB Neighborhood of RT #4 [3885351, 3891989] nucleoid_noc BcsQ RVT-GII Intron_maturas2 RsmG PRK05192 Feature: gene Location: 30542-31405 bp Feature: domain Description: Lactamase_B Location: 30590-31172 bp Feature: domain Description: Lactamase_B Location: 30590-31 1 72 bp Feature: gene Location: 31565-31735 bp Feature: domain Description: OrfB_Zn_ribbon Location: 31574-31652 bp Feature: domain Description: OrfB_Zn_ribbon Location: 31 574-31 652 bp Feature: gene Location: 32455-33747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32752-33385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32752-33385 bp Feature: domain Description: GIIM Note: maturase Location: 33466-33691 bp Feature: domain Description: GIIM Note: maturase Location: 33466-33691 bp Feature: gene Location: 33889-34359 bp Feature: domain Description: PRK13169 Location: 34015-34207 bp Feature: domain Description: PRK1 31 69 Location: 3401 5-34207 bp Feature: gene Location: 35287-36546 bp Feature: gene Location: 558682-559143 bp Feature: domain Description: Glyoxalase_2 Location: 558691-559045 bp Feature: domain Description: Glyoxalase_2 Location: 558691 -559045 bp Feature: gene Location: 559212-559403 bp Feature: gene Location: 560278-562035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560536-561235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560536-561 235 bp Feature: domain Description: HNHc Note: nucleases Location: 561760-561925 bp Feature: domain Description: HNHc Note: nucleases Location: 561 760-561 925 bp Feature: gene Location: 562200-562823 bp Feature: domain Description: STE14 Location: 562287-562821 bp Feature: domain Description: STE1 4 Location: 562287-562821 bp Feature: gene Location: 563663-563986 bp Feature: domain Description: BaeS Location: 563675-563744 bp Feature: domain Description: BaeS Location: 563675-563744 bp Feature: domain Description: PG_binding_1 Location: 563774-563876 bp Feature: domain Description: PG_binding_1 Location: 563774-563876 bp Feature: domain Description: PG_binding_1 Location: 563900-563942 bp Feature: domain Description: PG_binding_1 Location: 563900-563942 bp Feature: gene Location: 2961919-2962170 bp Feature: gene Location: 2962484-2962933 bp Feature: domain Description: ABC_trans_CmpB Location: 2962562-2962847 bp Feature: domain Description: ABC_trans_CmpB Location: 2962562-2962847 bp Feature: gene Location: 2963210-2964502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2963507-2964140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2963507-29641 40 bp Feature: domain Description: GIIM Note: maturase Location: 2964221-2964446 bp Feature: domain Description: GIIM Note: maturase Location: 2964221 -2964446 bp Feature: gene Location: 2965242-2965802 bp Feature: domain Description: Ferritin_like_AB Location: 2965446-2965791 bp Feature: domain Description: Ferritin_like_AB Location: 2965446-2965791 bp Feature: gene Location: 2965943-2966335 bp Feature: gene Location: 3885351-3886211 bp Feature: domain Description: nucleoid_noc Location: 3885441-3886161 bp Feature: domain Description: nucleoid_noc Location: 3885441 -38861 61 bp Feature: gene Location: 3886219-3886905 bp Feature: domain Description: BcsQ Location: 3886222-3886894 bp Feature: domain Description: BcsQ Location: 3886222-3886894 bp Feature: gene Location: 3887099-3888487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3887384-3887981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3887384-3887981 bp Feature: domain Description: Intron_maturas2 Location: 3888095-3888368 bp Feature: domain Description: Intron_maturas2 Location: 3888095-3888368 bp Feature: gene Location: 3889365-3890078 bp Feature: domain Description: RsmG Location: 3889386-3890013 bp Feature: domain Description: RsmG Location: 3889386-389001 3 bp Feature: gene Location: 3890103-3891989 bp Feature: domain Description: PRK05192 Location: 3890118-3891978 bp Feature: domain Description: PRK051 92 Location: 38901 1 8-3891 978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lactamase_B (smart00849), OrfB_Zn_ribbon (pfam07282), RVT-GII, GIIM (pfam08388), PRK13169 (DNA replication initiation control protein YabA), Glyoxalase_2 (pfam12681), HNHc (smart00507), STE14 (COG2020), BaeS (COG0642), PG_binding_1 (pfam01471)
ABC_trans_CmpB (pfam06541), Ferritin_like_AB (cd01045), nucleoid_noc (TIGR04285), BcsQ (COG1192), Intron_maturas2 (pfam01348), RsmG (COG0357), PRK05192 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG)