myRT

myRT report for GCA_000010505.1_ASM1050v1

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Seq: AP009380.1 Porphyromonas gingivalis ATCC 33277 DNA, complete genome (2354886 bp)
Overview 1 RT 1: 2147268-2152695 bp Neighborhood of RT #1 [2147268, 2152943] Cas1_I-II-III DUF772 DDE_Tnp_1 CRISPR_Cas6 RVT-CRISPR Cas_Cas1 Cmr6_III-B cas_Cmr5 Feature: gene Location: 2147268-2148026 bp Ori: BAG34444.1 Feature: domain Description: Cas1_I-II-III Location: 2147280-2147985 bp Feature: domain Description: Cas1 _I-II-III Location: 21 47280-21 47985 bp Feature: gene Location: 2148230-2149315 bp Ori: BAG34445.1 Feature: domain Description: DUF772 Location: 2148407-2148626 bp Feature: domain Description: DUF772 Location: 21 48407-21 48626 bp Feature: domain Description: DDE_Tnp_1 Location: 2148659-2149274 bp Feature: domain Description: DDE_Tnp_1 Location: 21 48659-21 49274 bp Feature: gene Location: 2149419-2151707 bp Ori: BAG34446.1 Feature: domain Description: CRISPR_Cas6 Location: 2149953-2150307 bp Feature: domain Description: CRISPR_Cas6 Location: 21 49953-21 50307 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2150457-2151069 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 21 50457-21 51 069 bp Feature: domain Description: Cas_Cas1 Location: 2151519-2151705 bp Feature: domain Description: Cas_Cas1 Location: 21 51 51 9-21 51 705 bp Feature: gene Location: 2151763-2152509 bp Ori: BAG34447.1 Feature: domain Description: Cmr6_III-B Location: 2151838-2152492 bp Feature: domain Description: Cmr6_III-B Location: 21 51 838-21 52492 bp Feature: gene Location: 2152506-2152943 bp Ori: BAG34448.1 Feature: domain Description: cas_Cmr5 Location: 2152545-2152695 bp Feature: domain Description: cas_Cmr5 Location: 21 52545-21 52695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas_Cas1 (pfam01867), Cmr6_III-B (cd09661), cas_Cmr5 (TIGR01881)