myRT

myRT report for GCA_000010565.1_ASM1056v1

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Seq: AP009389.1 Pelotomaculum thermopropionicum SI DNA, complete genome (3025375 bp)
Overview 1 RT 1: 1252904-1257018 bp 2 RT 2: 2205318-2213747 bp 3 RT 3: 2356127-2359374 bp 4 RT 4: 2517044-2528803 bp 5 RT 5: 2580289-2586287 bp Neighborhood of RT #1 [1252904, 1257018] DltB SGNH_hydrolase_like_2 SGNH_hydrolase RVT-GII Neighborhood of RT #2 [2205318, 2213794] Polbeta nitrilase RVT-UG6 PRK12804 PRK12804 Mrr_cat Neighborhood of RT #3 [2356127, 2359385] RVT-GII ZntA LMWP_ArsC Neighborhood of RT #4 [2517044, 2528817] DUF772 DDE_Tnp_1 DDE_Tnp_1 RVT-GII GIIM IS285 recomb_XerD PHA02517 InsE RVT-GII MmgE_PrpD PRK02261 Neighborhood of RT #5 [2580289, 2586287] M20_peptT_like M20_peptT_like RVT-Retrons RVT-GII GIIM Feature: gene Location: 1252904-1254100 bp Ori: BAF59395.1 Gene: DltB Feature: domain Description: DltB Location: 1252922-1254056 bp Feature: domain Description: DltB Location: 1 252922-1 254056 bp Feature: gene Location: 1254106-1255221 bp Ori: BAF59396.1 Feature: domain Description: SGNH_hydrolase_like_2 Location: 1254301-1254463 bp Feature: domain Description: SGNH_hydrolase_like_2 Location: 1 254301 -1 254463 bp Feature: domain Description: SGNH_hydrolase Location: 1255066-1255177 bp Feature: domain Description: SGNH_hydrolase Location: 1 255066-1 2551 77 bp Feature: gene Location: 1255481-1255723 bp Ori: BAF59397.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1255484-1255715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 255484-1 25571 5 bp Feature: gene Location: 1255978-1256301 bp Feature: gene Location: 1256407-1257018 bp Feature: gene Location: 2205318-2205779 bp Ori: BAF60280.1 Feature: domain Description: Polbeta Location: 2205360-2205645 bp Feature: domain Description: Polbeta Location: 2205360-2205645 bp Feature: gene Location: 2206246-2207139 bp Ori: BAF60281.1 Feature: domain Description: nitrilase Location: 2206330-2207050 bp Feature: domain Description: nitrilase Location: 2206330-2207050 bp Feature: gene Location: 2207145-2210285 bp Ori: BAF60282.1 Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 2207730-2208189 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 2207730-22081 89 bp Feature: gene Location: 2211216-2212676 bp Ori: BAF60283.1 Gene: FliC Feature: domain Description: PRK12804 Location: 2211219-2211807 bp Feature: domain Description: PRK1 2804 Location: 221 1 21 9-221 1 807 bp Feature: domain Description: PRK12804 Location: 2212044-2212668 bp Feature: domain Description: PRK1 2804 Location: 221 2044-221 2668 bp Feature: gene Location: 2213162-2213794 bp Ori: BAF60284.1 Feature: domain Description: Mrr_cat Location: 2213411-2213747 bp Feature: domain Description: Mrr_cat Location: 221 341 1 -221 3747 bp Feature: gene Location: 2356127-2356345 bp Feature: gene Location: 2356342-2356584 bp Feature: gene Location: 2356771-2357118 bp Ori: BAF60431.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356984-2357047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356984-2357047 bp Feature: gene Location: 2358158-2358823 bp Ori: BAF60432.1 Feature: domain Description: ZntA Location: 2358161-2358809 bp Feature: domain Description: ZntA Location: 23581 61 -2358809 bp Feature: gene Location: 2359122-2359385 bp Ori: BAF60433.1 Gene: Wzb Feature: domain Description: LMWP_ArsC Location: 2359125-2359374 bp Feature: domain Description: LMWP_ArsC Location: 23591 25-2359374 bp Feature: gene Location: 2517044-2518306 bp Ori: BAF60591.1 Feature: domain Description: DUF772 Location: 2517119-2517332 bp Feature: domain Description: DUF772 Location: 251 71 1 9-251 7332 bp Feature: domain Description: DDE_Tnp_1 Location: 2517530-2518238 bp Feature: domain Description: DDE_Tnp_1 Location: 251 7530-251 8238 bp Feature: gene Location: 2518482-2519123 bp Ori: BAF60592.1 Feature: domain Description: DDE_Tnp_1 Location: 2518689-2518869 bp Feature: domain Description: DDE_Tnp_1 Location: 251 8689-251 8869 bp Feature: gene Location: 2519632-2520918 bp Ori: BAF60593.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2519932-2520577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 9932-2520577 bp Feature: domain Description: GIIM Note: maturase Location: 2520643-2520844 bp Feature: domain Description: GIIM Note: maturase Location: 2520643-2520844 bp Feature: gene Location: 2522448-2523062 bp Ori: BAF60594.1 Feature: domain Description: IS285 Location: 2522454-2523060 bp Feature: domain Description: IS285 Location: 2522454-2523060 bp Feature: gene Location: 2523232-2523954 bp Ori: BAF60595.1 Feature: domain Description: recomb_XerD Location: 2523577-2523895 bp Feature: domain Description: recomb_XerD Location: 2523577-2523895 bp Feature: gene Location: 2524260-2524832 bp Ori: BAF60596.1 Feature: domain Description: PHA02517 Location: 2524263-2524818 bp Feature: domain Description: PHA0251 7 Location: 2524263-252481 8 bp Feature: gene Location: 2525077-2525379 bp Ori: BAF60597.1 Feature: domain Description: InsE Location: 2525086-2525302 bp Feature: domain Description: InsE Location: 2525086-2525302 bp Feature: gene Location: 2525608-2526255 bp Ori: BAF60598.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2525863-2526250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2525863-2526250 bp Feature: gene Location: 2526950-2528338 bp Ori: BAF60599.1 Gene: PrpD Feature: domain Description: MmgE_PrpD Location: 2526971-2528276 bp Feature: domain Description: MmgE_PrpD Location: 2526971 -2528276 bp Feature: gene Location: 2528392-2528817 bp Ori: BAF60600.1 Gene: Sbm Feature: domain Description: PRK02261 Location: 2528401-2528803 bp Feature: domain Description: PRK02261 Location: 2528401 -2528803 bp Feature: gene Location: 2580289-2580918 bp Feature: gene Location: 2580905-2581723 bp Ori: BAF60647.1 Feature: domain Description: M20_peptT_like Location: 2581031-2581289 bp Feature: domain Description: M20_peptT_like Location: 2581 031 -2581 289 bp Feature: domain Description: M20_peptT_like Location: 2581379-2581538 bp Feature: domain Description: M20_peptT_like Location: 2581 379-2581 538 bp Feature: gene Location: 2581739-2583031 bp Ori: BAF60648.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2581757-2582288 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2581 757-2582288 bp Feature: gene Location: 2583157-2584428 bp Ori: BAF60649.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2583370-2583991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2583370-2583991 bp Feature: domain Description: GIIM Note: maturase Location: 2584033-2584267 bp Feature: domain Description: GIIM Note: maturase Location: 2584033-2584267 bp Feature: gene Location: 2585618-2586034 bp Feature: gene Location: 2586192-2586287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DltB (COG1696), SGNH_hydrolase_like_2 (cd01834), SGNH_hydrolase (cl01053), RVT-GII, Polbeta (pfam18765), nitrilase (cl11424), RVT-UG6, PRK12804 (flagellin; Provisional), Mrr_cat (pfam04471), ZntA (COG2217)
LMWP_ArsC (cd16345), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), GIIM (pfam08388), IS285 (COG3328), recomb_XerD (TIGR02225), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), MmgE_PrpD (pfam03972), PRK02261 (methylaspartate mutase subunit S; Provisional)
M20_peptT_like (cd05683), RVT-Retrons