myRT

myRT report for GCA_000010625.1_ASM1062v1

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Seq: AP009552.1 Microcystis aeruginosa NIES-843 DNA, complete genome (5842795 bp)
Overview 1 RT 1: 510610-515390 bp 2 RT 2: 1787030-1791614 bp 3 RT 3: 3029146-3033495 bp 4 RT 4: 4467493-4471169 bp 5 RT 5: 4719654-4725445 bp 6 RT 6: 5745388-5752065 bp Neighborhood of RT #1 [510610, 515404] RVT_N RVT-GII GIIM McrA RuvC wecB Neighborhood of RT #2 [1787030, 1791614] KOG0718 RVT_N RVT-GII GIIM McrA Neighborhood of RT #3 [3029146, 3033495] BrnA_antitoxin COG2929 RVT-GII GIIM McrA COG3415 DDE_3 RVT_N RVT-GII Neighborhood of RT #4 [4467493, 4471169] InsQ RVT_N RVT-GII YkfC McrA Neighborhood of RT #5 [4719654, 4725445] ZntA RVT_N RVT-GII GIIM McrA Neighborhood of RT #6 [5745388, 5752112] TPR_1 TPR_1 TPR_1 TPR_1 RVT_N RVT-GII GIIM McrA HflB HTH_1 PBP2_CbbR_RubisCO_like Feature: gene Location: 510610-510792 bp Feature: gene Location: 511065-511220 bp Feature: gene Location: 511461-513305 bp Ori: BAG00407.1 Feature: domain Description: RVT_N Location: 511527-511770 bp Feature: domain Description: RVT_N Location: 51 1 527-51 1 770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511815-512487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 1 81 5-51 2487 bp Feature: domain Description: GIIM Note: maturase Location: 512586-512808 bp Feature: domain Description: GIIM Note: maturase Location: 51 2586-51 2808 bp Feature: domain Description: McrA Location: 512814-513192 bp Feature: domain Description: McrA Location: 51 281 4-51 31 92 bp Feature: gene Location: 513797-514282 bp Ori: BAG00408.1 Gene: ruvC Feature: domain Description: RuvC Location: 513812-514259 bp Feature: domain Description: RuvC Location: 51 381 2-51 4259 bp Feature: gene Location: 514286-515404 bp Ori: BAG00409.1 Feature: domain Description: wecB Location: 514313-515390 bp Feature: domain Description: wecB Location: 51 431 3-51 5390 bp Feature: gene Location: 1787030-1787224 bp Feature: gene Location: 1787651-1788733 bp Ori: BAG01817.1 Feature: domain Description: KOG0718 Location: 1788164-1788458 bp Feature: domain Description: KOG071 8 Location: 1 7881 64-1 788458 bp Feature: gene Location: 1788827-1790671 bp Ori: BAG01818.1 Feature: domain Description: RVT_N Location: 1788893-1789136 bp Feature: domain Description: RVT_N Location: 1 788893-1 7891 36 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1789181-1789853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7891 81 -1 789853 bp Feature: domain Description: GIIM Note: maturase Location: 1789952-1790174 bp Feature: domain Description: GIIM Note: maturase Location: 1 789952-1 7901 74 bp Feature: domain Description: McrA Location: 1790180-1790558 bp Feature: domain Description: McrA Location: 1 7901 80-1 790558 bp Feature: gene Location: 1790912-1791067 bp Feature: gene Location: 1791264-1791614 bp Feature: gene Location: 3029146-3029400 bp Ori: BAG03153.1 Feature: domain Description: BrnA_antitoxin Location: 3029176-3029323 bp Feature: domain Description: BrnA_antitoxin Location: 30291 76-3029323 bp Feature: gene Location: 3029384-3029581 bp Ori: BAG03154.1 Feature: domain Description: COG2929 Location: 3029390-3029576 bp Feature: domain Description: COG2929 Location: 3029390-3029576 bp Feature: gene Location: 3029730-3030806 bp Ori: BAG03155.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3029763-3029988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3029763-3029988 bp Feature: domain Description: GIIM Note: maturase Location: 3030087-3030309 bp Feature: domain Description: GIIM Note: maturase Location: 3030087-3030309 bp Feature: domain Description: McrA Location: 3030309-3030693 bp Feature: domain Description: McrA Location: 3030309-3030693 bp Feature: gene Location: 3030916-3031959 bp Ori: BAG03156.1 Feature: domain Description: COG3415 Location: 3031042-3031381 bp Feature: domain Description: COG341 5 Location: 3031 042-3031 381 bp Feature: domain Description: DDE_3 Location: 3031432-3031843 bp Feature: domain Description: DDE_3 Location: 3031 432-3031 843 bp Feature: gene Location: 3031956-3032711 bp Ori: BAG03157.1 Feature: domain Description: RVT_N Location: 3032022-3032265 bp Feature: domain Description: RVT_N Location: 3032022-3032265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3032310-3032703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303231 0-3032703 bp Feature: gene Location: 3032952-3033107 bp Feature: gene Location: 3033304-3033495 bp Feature: gene Location: 4467493-4467723 bp Feature: gene Location: 4467819-4468922 bp Ori: BAG04700.1 Feature: domain Description: InsQ Location: 4467921-4468797 bp Feature: domain Description: InsQ Location: 4467921 -4468797 bp Feature: gene Location: 4468888-4470621 bp Ori: BAG04701.1 Feature: domain Description: RVT_N Location: 4468921-4469167 bp Feature: domain Description: RVT_N Location: 4468921 -44691 67 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4469209-4469878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4469209-4469878 bp Feature: domain Description: YkfC Location: 4470004-4470286 bp Feature: domain Description: YkfC Location: 4470004-4470286 bp Feature: domain Description: McrA Location: 4470289-4470589 bp Feature: domain Description: McrA Location: 4470289-4470589 bp Feature: gene Location: 4470664-4470855 bp Feature: gene Location: 4471002-4471169 bp Feature: gene Location: 4719654-4719815 bp Feature: gene Location: 4719847-4722177 bp Ori: BAG04966.1 Feature: domain Description: ZntA Location: 4719880-4722139 bp Feature: domain Description: ZntA Location: 471 9880-47221 39 bp Feature: gene Location: 4722838-4724679 bp Ori: BAG04967.1 Feature: domain Description: RVT_N Location: 4722904-4723147 bp Feature: domain Description: RVT_N Location: 4722904-47231 47 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4723192-4723864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47231 92-4723864 bp Feature: domain Description: GIIM Note: maturase Location: 4723963-4724185 bp Feature: domain Description: GIIM Note: maturase Location: 4723963-47241 85 bp Feature: domain Description: McrA Location: 4724185-4724569 bp Feature: domain Description: McrA Location: 47241 85-4724569 bp Feature: gene Location: 4724932-4725087 bp Feature: gene Location: 4725272-4725445 bp Feature: gene Location: 5745388-5746572 bp Ori: BAG06025.1 Feature: domain Description: TPR_1 Location: 5746096-5746189 bp Feature: domain Description: TPR_1 Location: 5746096-57461 89 bp Feature: domain Description: TPR_1 Location: 5746195-5746294 bp Feature: domain Description: TPR_1 Location: 57461 95-5746294 bp Feature: domain Description: TPR_1 Location: 5746309-5746396 bp Feature: domain Description: TPR_1 Location: 5746309-5746396 bp Feature: domain Description: TPR_1 Location: 5746402-5746498 bp Feature: domain Description: TPR_1 Location: 5746402-5746498 bp Feature: gene Location: 5746916-5747071 bp Feature: gene Location: 5747312-5749156 bp Ori: BAG06027.1 Feature: domain Description: RVT_N Location: 5747378-5747621 bp Feature: domain Description: RVT_N Location: 5747378-5747621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5747666-5748338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5747666-5748338 bp Feature: domain Description: GIIM Note: maturase Location: 5748437-5748659 bp Feature: domain Description: GIIM Note: maturase Location: 5748437-5748659 bp Feature: domain Description: McrA Location: 5748665-5749043 bp Feature: domain Description: McrA Location: 5748665-5749043 bp Feature: gene Location: 5749266-5751143 bp Ori: BAG06028.1 Gene: ftsH Feature: domain Description: HflB Location: 5749383-5751117 bp Feature: domain Description: HflB Location: 5749383-5751 1 1 7 bp Feature: gene Location: 5751192-5752112 bp Ori: BAG06029.1 Feature: domain Description: HTH_1 Location: 5751210-5751387 bp Feature: domain Description: HTH_1 Location: 5751 21 0-5751 387 bp Feature: domain Description: PBP2_CbbR_RubisCO_like Location: 5751477-5752065 bp Feature: domain Description: PBP2_CbbR_RubisCO_like Location: 5751 477-5752065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), RuvC (pfam02075), wecB (TIGR00236), KOG0718 (KOG0718, Molecular chaperone (DnaJ superfamily) ), BrnA_antitoxin (pfam14384), COG2929 (Uncharacterized conserved protein, DUF497 family ), COG3415 (Transposase )
DDE_3 (pfam13358), InsQ (COG0675), YkfC (COG3344), ZntA (COG2217), TPR_1 (pfam00515), HflB (COG0465), HTH_1 (pfam00126), PBP2_CbbR_RubisCO_like (cd08419)