myRT

myRT report for GCA_000012425.1_ASM1242v1

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Seq: CP000089.1 Dechloromonas aromatica RCB, complete genome (4501104 bp)
Overview 1 RT 1: 758609-763143 bp 2 RT 2: 2431610-2439113 bp 3 RT 3: 4103332-4112302 bp Neighborhood of RT #1 [758609, 763148] Na_H_antiport_1 RVT-GII GIIM CytC552 Neighborhood of RT #2 [2431610, 2439136] Gdt1 RhaT RVT-GII GIIM GlnK CusA Neighborhood of RT #3 [4103332, 4112361] AAMH_A PDC1_DGC_like PDC2_DGC_like PRK11107 PRK11107 RVT-GII GIIM COG3666 DDE_Tnp_1 Feature: gene Location: 758609-759778 bp Ori: AAZ45444.1 Feature: domain Description: Na_H_antiport_1 Location: 758651-759749 bp Feature: domain Description: Na_H_antiport_1 Location: 758651 -759749 bp Feature: gene Location: 759841-760194 bp Feature: gene Location: 760413-761702 bp Ori: AAZ45446.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760662-761325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760662-761 325 bp Feature: domain Description: GIIM Note: maturase Location: 761394-761598 bp Feature: domain Description: GIIM Note: maturase Location: 761 394-761 598 bp Feature: gene Location: 762041-762622 bp Feature: gene Location: 762834-763148 bp Ori: AAZ45448.1 Feature: domain Description: CytC552 Location: 762867-763143 bp Feature: domain Description: CytC552 Location: 762867-7631 43 bp Feature: gene Location: 2431610-2432221 bp Ori: AAZ46985.1 Feature: domain Description: Gdt1 Location: 2431649-2432195 bp Feature: domain Description: Gdt1 Location: 2431 649-24321 95 bp Feature: gene Location: 2432242-2433294 bp Ori: AAZ46986.1 Feature: domain Description: RhaT Location: 2432275-2433103 bp Feature: domain Description: RhaT Location: 2432275-24331 03 bp Feature: gene Location: 2433628-2434917 bp Ori: AAZ46987.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2433877-2434540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2433877-2434540 bp Feature: domain Description: GIIM Note: maturase Location: 2434609-2434813 bp Feature: domain Description: GIIM Note: maturase Location: 2434609-243481 3 bp Feature: gene Location: 2435706-2436041 bp Ori: AAZ46988.1 Feature: domain Description: GlnK Location: 2435709-2436030 bp Feature: domain Description: GlnK Location: 2435709-2436030 bp Feature: gene Location: 2436038-2439136 bp Ori: AAZ46989.1 Feature: domain Description: CusA Location: 2436041-2439113 bp Feature: domain Description: CusA Location: 2436041 -24391 1 3 bp Feature: gene Location: 4103332-4104837 bp Ori: AAZ48548.1 Feature: domain Description: AAMH_A Location: 4103374-4104775 bp Feature: domain Description: AAMH_A Location: 41 03374-41 04775 bp Feature: gene Location: 4105108-4107387 bp Ori: AAZ48549.1 Feature: domain Description: PDC1_DGC_like Location: 4105309-4105648 bp Feature: domain Description: PDC1 _DGC_like Location: 41 05309-41 05648 bp Feature: domain Description: PDC2_DGC_like Location: 4105666-4105888 bp Feature: domain Description: PDC2_DGC_like Location: 41 05666-41 05888 bp Feature: domain Description: PRK11107 Location: 4106143-4106953 bp Feature: domain Description: PRK1 1 1 07 Location: 41 061 43-41 06953 bp Feature: domain Description: PRK11107 Location: 4107010-4107373 bp Feature: domain Description: PRK1 1 1 07 Location: 41 0701 0-41 07373 bp Feature: gene Location: 4107965-4109254 bp Ori: AAZ48550.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4108214-4108877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 0821 4-41 08877 bp Feature: domain Description: GIIM Note: maturase Location: 4108946-4109150 bp Feature: domain Description: GIIM Note: maturase Location: 41 08946-41 091 50 bp Feature: gene Location: 4109905-4110492 bp Feature: gene Location: 4110880-4112361 bp Ori: AAZ48552.1 Feature: domain Description: COG3666 Location: 4110940-4111420 bp Feature: domain Description: COG3666 Location: 41 1 0940-41 1 1 420 bp Feature: domain Description: DDE_Tnp_1 Location: 4111624-4112302 bp Feature: domain Description: DDE_Tnp_1 Location: 41 1 1 624-41 1 2302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Na_H_antiport_1 (pfam06965), RVT-GII, GIIM (pfam08388), CytC552 (COG4654), Gdt1 (COG2119), RhaT (TIGR00776), GlnK (COG0347), CusA (COG3696), AAMH_A (cd01057), PDC1_DGC_like (cd12914)
PDC2_DGC_like (cd12915), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), COG3666 (Transposase ), DDE_Tnp_1 (pfam01609)