myRT

myRT report for GCA_000012485.1_ASM1248v1

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Seq: CP000096.1 (2364842 bp)
Overview 1 RT 1: 751065-754403 bp 2 RT 2: 990394-994576 bp 3 RT 3: 1001749-1005947 bp 4 RT 4: 2029751-2036120 bp Neighborhood of RT #1 [751065, 754429] LomR RVT_N RVT-GII GIIM OMP_b-brl Neighborhood of RT #2 [990394, 994746] ocin_ocin_ocin_TIGR03798 ocin_ocin_ocin_TIGR03798 RVT-UG4 rSAM_Clo7bot NHLM_micro_HlyD type_I_hlyD Neighborhood of RT #3 [1001749, 1006021] ocin_ocin_ocin_TIGR03798 TOMM_pelo RVT-UG4 HTH_57 antibiot_sagB mthyl_mthyl_mthyl_TIGR00027 Neighborhood of RT #4 [2029751, 2036120] YiaG InsE RVT_N RVT-GII GIIM Feature: gene Location: 751065-751325 bp Feature: gene Location: 751569-751856 bp Feature: domain Description: LomR Location: 751590-751845 bp Feature: domain Description: LomR Location: 751 590-751 845 bp Feature: gene Location: 751910-753397 bp Feature: domain Description: RVT_N Location: 751955-752198 bp Feature: domain Description: RVT_N Location: 751 955-7521 98 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752243-752879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752243-752879 bp Feature: domain Description: GIIM Note: maturase Location: 752930-753164 bp Feature: domain Description: GIIM Note: maturase Location: 752930-7531 64 bp Feature: gene Location: 753553-753792 bp Feature: gene Location: 753971-754429 bp Feature: domain Description: OMP_b-brl Location: 754070-754403 bp Feature: domain Description: OMP_b-brl Location: 754070-754403 bp Feature: gene Location: 990394-990660 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 990403-990550 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 990403-990550 bp Feature: gene Location: 990850-991086 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 990859-991036 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 990859-991 036 bp Feature: gene Location: 991184-992020 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 991337-991781 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 991 337-991 781 bp Feature: gene Location: 992064-993515 bp Feature: domain Description: rSAM_Clo7bot Location: 992283-993282 bp Feature: domain Description: rSAM_Clo7bot Location: 992283-993282 bp Feature: gene Location: 993628-994746 bp Feature: domain Description: NHLM_micro_HlyD Location: 993664-994066 bp Feature: domain Description: NHLM_micro_HlyD Location: 993664-994066 bp Feature: domain Description: type_I_hlyD Location: 994177-994576 bp Feature: domain Description: type_I_hlyD Location: 9941 77-994576 bp Feature: gene Location: 1001749-1002009 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 1001758-1001905 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 1 001 758-1 001 905 bp Feature: gene Location: 1002206-1002499 bp Feature: domain Description: TOMM_pelo Location: 1002227-1002449 bp Feature: domain Description: TOMM_pelo Location: 1 002227-1 002449 bp Feature: gene Location: 1002604-1003110 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1002613-1002871 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 00261 3-1 002871 bp Feature: gene Location: 1003455-1004870 bp Feature: domain Description: HTH_57 Location: 1003551-1003788 bp Feature: domain Description: HTH_57 Location: 1 003551 -1 003788 bp Feature: domain Description: antibiot_sagB Location: 1004349-1004859 bp Feature: domain Description: antibiot_sagB Location: 1 004349-1 004859 bp Feature: gene Location: 1004903-1006021 bp Feature: domain Description: mthyl_mthyl_mthyl_TIGR00027 Location: 1005227-1005947 bp Feature: domain Description: mthyl_mthyl_mthyl_TIGR00027 Location: 1 005227-1 005947 bp Feature: gene Location: 2029751-2030074 bp Feature: domain Description: YiaG Location: 2029766-2030069 bp Feature: domain Description: YiaG Location: 2029766-2030069 bp Feature: gene Location: 2030256-2030552 bp Feature: domain Description: InsE Location: 2030271-2030544 bp Feature: domain Description: InsE Location: 2030271 -2030544 bp Feature: gene Location: 2031253-2032740 bp Feature: domain Description: RVT_N Location: 2031298-2031541 bp Feature: domain Description: RVT_N Location: 2031 298-2031 541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031586-2032222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031 586-2032222 bp Feature: domain Description: GIIM Note: maturase Location: 2032273-2032507 bp Feature: domain Description: GIIM Note: maturase Location: 2032273-2032507 bp Feature: gene Location: 2033414-2034142 bp Feature: gene Location: 2034276-2036120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LomR (COG3637), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), OMP_b-brl (pfam13505), ocin_ocin_ocin_TIGR03798, RVT-UG4, rSAM_Clo7bot (TIGR04334), NHLM_micro_HlyD (TIGR03794), type_I_hlyD (TIGR01843)
TOMM_pelo (TIGR03793), HTH_57 (pfam18679), antibiot_sagB (TIGR03605), mthyl_mthyl_mthyl_TIGR00027, YiaG (COG2944), InsE (COG2963)