myRT

myRT report for GCA_000013305.1_ASM1330v1

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Seq: CP000247.1 Escherichia coli 536, complete genome (4938920 bp)
Overview 1 RT 1: 2837717-2842279 bp 2 RT 2: 4006163-4011016 bp Neighborhood of RT #1 [2837717, 2842428] HTH_29 HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Neighborhood of RT #2 [4006163, 4011057] InsE rve RVT-GII GIIM zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 2837717-2837917 bp Feature: gene Location: 2838745-2839782 bp Ori: ABG70690.1 Feature: domain Description: HTH_29 Location: 2838841-2839012 bp Feature: domain Description: HTH_29 Location: 2838841 -283901 2 bp Feature: domain Description: HTH_33 Location: 2839045-2839207 bp Feature: domain Description: HTH_33 Location: 2839045-2839207 bp Feature: domain Description: DDE_3 Location: 2839249-2839678 bp Feature: domain Description: DDE_3 Location: 2839249-2839678 bp Feature: gene Location: 2839884-2841254 bp Ori: ABG70691.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2840145-2840601 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28401 45-2840601 bp Feature: gene Location: 2841293-2842072 bp Ori: ABG70692.1 Feature: domain Description: PRK09183 Location: 2841299-2842070 bp Feature: domain Description: PRK091 83 Location: 2841 299-2842070 bp Feature: gene Location: 2842072-2842428 bp Ori: ABG70693.1 Feature: domain Description: COG4584 Location: 2842087-2842279 bp Feature: domain Description: COG4584 Location: 2842087-2842279 bp Feature: gene Location: 4006163-4006492 bp Ori: ABG71807.1 Feature: domain Description: InsE Location: 4006277-4006472 bp Feature: domain Description: InsE Location: 4006277-4006472 bp Feature: gene Location: 4007002-4007694 bp Ori: ABG71808.1 Feature: domain Description: rve Location: 4007137-4007503 bp Feature: domain Description: rve Location: 40071 37-4007503 bp Feature: gene Location: 4008032-4009264 bp Ori: ABG71809.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4008233-4008887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4008233-4008887 bp Feature: domain Description: GIIM Note: maturase Location: 4008965-4009187 bp Feature: domain Description: GIIM Note: maturase Location: 4008965-40091 87 bp Feature: gene Location: 4009478-4009678 bp Feature: gene Location: 4009726-4011057 bp Ori: ABG71811.1 Feature: domain Description: zf-IS66 Location: 4010002-4010134 bp Feature: domain Description: zf-IS66 Location: 401 0002-401 01 34 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4010179-4011016 bp Feature: domain Description: DDE_Tnp_IS66 Location: 401 01 79-401 1 01 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase ), InsE (COG2963), rve (pfam00665), RVT-GII, GIIM (pfam08388)
zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)