myRT

myRT report for GCA_000013325.1_ASM1332v1

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Seq: CP000248.1 Novosphingobium aromaticivorans DSM 12444, complete genome (3561584 bp)
Overview 1 RT 1: 2332102-2338002 bp Neighborhood of RT #1 [2332102, 2339465] YAcAr RVT-GII Intron_maturas2 Spo0J Feature: gene Location: 2332102-2333055 bp Ori: ABD26632.1 Feature: domain Description: YAcAr Location: 2332648-2332867 bp Feature: domain Description: YAcAr Location: 2332648-2332867 bp Feature: gene Location: 2333356-2333778 bp Feature: gene Location: 2334380-2336281 bp Ori: ABD26634.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2334647-2335484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2334647-2335484 bp Feature: domain Description: Intron_maturas2 Location: 2335607-2335853 bp Feature: domain Description: Intron_maturas2 Location: 2335607-2335853 bp Feature: gene Location: 2336296-2336844 bp Feature: gene Location: 2337477-2339465 bp Ori: ABD26636.1 Feature: domain Description: Spo0J Location: 2337483-2338002 bp Feature: domain Description: Spo0J Location: 2337483-2338002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YAcAr, RVT-GII, Intron_maturas2 (pfam01348), Spo0J (COG1475)

Seq: CP000676.1 Novosphingobium aromaticivorans DSM 12444 plasmid pNL1, complete sequence (184462 bp)
Overview 1 RT 1: 95510-105958 bp 2 RT 2: 110152-113553 bp Neighborhood of RT #1 [95510, 105958] ParB_N_like HATPase_PhoQ-like RVT-GII Intron_maturas2 xerC xerC xerC Neighborhood of RT #2 [110152, 113553] RVT-GII Intron_maturas2 Feature: gene Location: 95510-97582 bp Ori: ABP64168.1 Feature: domain Description: ParB_N_like Location: 95594-95825 bp Feature: domain Description: ParB_N_like Location: 95594-9582 5 bp Feature: gene Location: 97655-99322 bp Ori: ABP64169.1 Feature: domain Description: HATPase_PhoQ-like Location: 97730-97865 bp Feature: domain Description: HATPase_PhoQ-like Location: 97730-97865 bp Feature: gene Location: 100332-102233 bp Ori: ABP64170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100599-101436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100599-101436 bp Feature: domain Description: Intron_maturas2 Location: 101559-101805 bp Feature: domain Description: Intron_maturas2 Location: 101559-101805 bp Feature: gene Location: 102783-104174 bp Ori: ABP64171.1 Feature: domain Description: xerC Location: 102888-103599 bp Feature: domain Description: xerC Location: 102 888-103599 bp Feature: domain Description: xerC Location: 103797-103950 bp Feature: domain Description: xerC Location: 103797-103950 bp Feature: domain Description: xerC Location: 104025-104088 bp Feature: domain Description: xerC Location: 10402 5-104088 bp Feature: gene Location: 104171-105958 bp Feature: gene Location: 110152-110439 bp Feature: gene Location: 110653-110814 bp Feature: gene Location: 111024-112865 bp Ori: ABP64179.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111291-112128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1112 91-112 12 8 bp Feature: domain Description: Intron_maturas2 Location: 112215-112500 bp Feature: domain Description: Intron_maturas2 Location: 112 2 15-112 500 bp Feature: gene Location: 112862-113305 bp Feature: gene Location: 113302-113553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like (cd16411), HATPase_PhoQ-like (cd16954), RVT-GII, Intron_maturas2 (pfam01348), xerC (PRK01287)