myRT

myRT report for GCA_000013645.1_ASM1364v1

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Seq: CP000270.1 Paraburkholderia xenovorans LB400 chromosome 1, complete sequence (4895836 bp)
Overview 1 RT 1: 1990315-1994088 bp 2 RT 2: 3155840-3159829 bp 3 RT 3: 3577572-3581469 bp Neighborhood of RT #1 [1990315, 1994279] Phage_AlpA RVT-GII GIIM LT_VirB1_like Neighborhood of RT #2 [3155840, 3160026] ndk YccA_like RVT-GII GIIM YycJ-like_MBL-fold Neighborhood of RT #3 [3577572, 3581469] DUF3085 RVT-GII GIIM PAPS_reductase Feature: gene Location: 1990315-1990551 bp Ori: ABE30297.1 Feature: domain Description: Phage_AlpA Location: 1990348-1990486 bp Feature: domain Description: Phage_AlpA Location: 1 990348-1 990486 bp Feature: gene Location: 1990529-1990822 bp Feature: gene Location: 1991477-1992844 bp Ori: ABE30299.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1991810-1992425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 991 81 0-1 992425 bp Feature: domain Description: GIIM Note: maturase Location: 1992485-1992686 bp Feature: domain Description: GIIM Note: maturase Location: 1 992485-1 992686 bp Feature: gene Location: 1993051-1993626 bp Feature: gene Location: 1993626-1994279 bp Ori: ABE30301.1 Feature: domain Description: LT_VirB1_like Location: 1993653-1994088 bp Feature: domain Description: LT_VirB1 _like Location: 1 993653-1 994088 bp Feature: gene Location: 3155840-3156265 bp Ori: ABE31364.1 Feature: domain Description: ndk Location: 3155849-3156245 bp Feature: domain Description: ndk Location: 31 55849-31 56245 bp Feature: gene Location: 3156555-3157253 bp Ori: ABE31365.1 Feature: domain Description: YccA_like Location: 3156612-3157239 bp Feature: domain Description: YccA_like Location: 31 5661 2-31 57239 bp Feature: gene Location: 3157378-3158745 bp Ori: ABE31366.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3157711-3158326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 5771 1 -31 58326 bp Feature: domain Description: GIIM Note: maturase Location: 3158386-3158584 bp Feature: domain Description: GIIM Note: maturase Location: 31 58386-31 58584 bp Feature: gene Location: 3158816-3159133 bp Feature: gene Location: 3159253-3160026 bp Ori: ABE31368.1 Feature: domain Description: YycJ-like_MBL-fold Location: 3159268-3159829 bp Feature: domain Description: YycJ-like_MBL-fold Location: 31 59268-31 59829 bp Feature: gene Location: 3577572-3577925 bp Ori: ABE31739.1 Feature: domain Description: DUF3085 Location: 3577638-3577905 bp Feature: domain Description: DUF3085 Location: 3577638-3577905 bp Feature: gene Location: 3578070-3578324 bp Feature: gene Location: 3578373-3579740 bp Ori: ABE31741.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3578706-3579321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3578706-3579321 bp Feature: domain Description: GIIM Note: maturase Location: 3579378-3579582 bp Feature: domain Description: GIIM Note: maturase Location: 3579378-3579582 bp Feature: gene Location: 3579925-3580767 bp Ori: ABE31742.1 Feature: domain Description: PAPS_reductase Location: 3579958-3580507 bp Feature: domain Description: PAPS_reductase Location: 3579958-3580507 bp Feature: gene Location: 3581086-3581469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_AlpA (pfam05930), RVT-GII, GIIM (pfam08388), LT_VirB1_like, ndk (PRK00668), YccA_like (cd10433), YycJ-like_MBL-fold (cd07733), DUF3085 (pfam11284), PAPS_reductase (TIGR02057)

Seq: CP000271.1 Paraburkholderia xenovorans LB400 chromosome 2, complete sequence (3363523 bp)
Overview 1 RT 1: 1101142-1107006 bp Neighborhood of RT #1 [1101142, 1107014] PAP2_3 SLATT_5 RVT-UG17 Acetyltransf_3 IclR Feature: gene Location: 1101142-1102089 bp Ori: ABE33932.1 Feature: domain Description: PAP2_3 Location: 1101475-1102018 bp Feature: domain Description: PAP2 _3 Location: 1101475-1102 018 bp Feature: gene Location: 1102643-1103272 bp Ori: ABE33933.1 Feature: domain Description: SLATT_5 Location: 1102685-1103255 bp Feature: domain Description: SLATT_5 Location: 1102 685-11032 55 bp Feature: gene Location: 1103274-1104671 bp Ori: ABE33934.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1103505-1104105 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1103505-1104105 bp Feature: gene Location: 1105321-1105671 bp Ori: ABE33935.1 Feature: domain Description: Acetyltransf_3 Location: 1105363-1105666 bp Feature: domain Description: Acetyltransf_3 Location: 1105363-1105666 bp Feature: gene Location: 1106265-1107014 bp Ori: ABE33936.1 Feature: domain Description: IclR Location: 1106292-1107006 bp Feature: domain Description: IclR Location: 11062 92 -1107006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_3 (pfam14378), SLATT_5 (pfam18160), RVT-UG17, Acetyltransf_3 (pfam13302), IclR (pfam01614)