myRT

myRT report for GCA_000013725.1_ASM1372v1

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Seq: CP000300.1 Methanococcoides burtonii DSM 6242, complete genome (2575032 bp)
Overview 1 RT 1: 708100-710932 bp 2 RT 2: 797524-807024 bp 3 RT 3: 2107476-2112495 bp 4 RT 4: 2143433-2150112 bp Neighborhood of RT #1 [708100, 711330] DUF21 RVT_N RVT-GII GIIM Neighborhood of RT #2 [797524, 807032] IOR_alpha RVT_N RVT-GII GIIM Rsm22 BaeS Neighborhood of RT #3 [2107476, 2112495] RVT_N RVT-GII GIIM PGF_pre_PGF Neighborhood of RT #4 [2143433, 2150114] UDP_AE_SDR_e RVT_N RVT-GII GIIM PRK01002 Feature: gene Location: 708100-709125 bp Ori: ABE51654.1 Feature: domain Description: DUF21 Location: 708124-708601 bp Feature: domain Description: DUF21 Location: 7081 24-708601 bp Feature: gene Location: 709180-709410 bp Feature: gene Location: 709600-711330 bp Ori: ABE51656.1 Feature: domain Description: RVT_N Location: 709699-709942 bp Feature: domain Description: RVT_N Location: 709699-709942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709987-710647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709987-71 0647 bp Feature: domain Description: GIIM Note: maturase Location: 710698-710932 bp Feature: domain Description: GIIM Note: maturase Location: 71 0698-71 0932 bp Feature: gene Location: 797524-799410 bp Ori: ABE51723.1 Feature: domain Description: IOR_alpha Location: 797542-799387 bp Feature: domain Description: IOR_alpha Location: 797542-799387 bp Feature: gene Location: 799623-799979 bp Feature: gene Location: 801921-803651 bp Ori: ABE51725.1 Feature: domain Description: RVT_N Location: 802020-802263 bp Feature: domain Description: RVT_N Location: 802020-802263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802308-802968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802308-802968 bp Feature: domain Description: GIIM Note: maturase Location: 803019-803253 bp Feature: domain Description: GIIM Note: maturase Location: 80301 9-803253 bp Feature: gene Location: 804197-805687 bp Ori: ABE51726.1 Feature: domain Description: Rsm22 Location: 804644-805397 bp Feature: domain Description: Rsm22 Location: 804644-805397 bp Feature: gene Location: 805881-807032 bp Ori: ABE51727.1 Feature: domain Description: BaeS Location: 806349-807024 bp Feature: domain Description: BaeS Location: 806349-807024 bp Feature: gene Location: 2107476-2109206 bp Ori: ABE52883.1 Feature: domain Description: RVT_N Location: 2107575-2107818 bp Feature: domain Description: RVT_N Location: 21 07575-21 0781 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2107863-2108523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 07863-21 08523 bp Feature: domain Description: GIIM Note: maturase Location: 2108574-2108808 bp Feature: domain Description: GIIM Note: maturase Location: 21 08574-21 08808 bp Feature: gene Location: 2109858-2111165 bp Ori: ABE52884.1 Feature: domain Description: PGF_pre_PGF Location: 2110527-2110986 bp Feature: domain Description: PGF_pre_PGF Location: 21 1 0527-21 1 0986 bp Feature: gene Location: 2111374-2112495 bp Feature: gene Location: 2143433-2144332 bp Ori: ABE52913.1 Feature: domain Description: UDP_AE_SDR_e Location: 2143442-2144327 bp Feature: domain Description: UDP_AE_SDR_e Location: 21 43442-21 44327 bp Feature: gene Location: 2144877-2145461 bp Feature: gene Location: 2146770-2148548 bp Ori: ABE52915.1 Feature: domain Description: RVT_N Location: 2146917-2147160 bp Feature: domain Description: RVT_N Location: 21 4691 7-21 471 60 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2147205-2147865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 47205-21 47865 bp Feature: domain Description: GIIM Note: maturase Location: 2147916-2148150 bp Feature: domain Description: GIIM Note: maturase Location: 21 4791 6-21 481 50 bp Feature: gene Location: 2148794-2149015 bp Feature: gene Location: 2149692-2150114 bp Ori: ABE52917.1 Feature: domain Description: PRK01002 Location: 2149701-2150112 bp Feature: domain Description: PRK01 002 Location: 21 49701 -21 501 1 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF21 (pfam01595), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), IOR_alpha (TIGR03336), Rsm22 (pfam09243), BaeS (COG0642), PGF_pre_PGF (TIGR04213), UDP_AE_SDR_e (cd05256), PRK01002 (nickel responsive regulator; Provisional)