myRT

myRT report for GCA_000013885.1_ASM1388v1

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Seq: CP000319.1 Nitrobacter hamburgensis X14, complete genome (4406967 bp)
Overview 1 RT 1: 4263399-4267540 bp Neighborhood of RT #1 [4263399, 4267629] RVT-GII GIIM DUF4096 IS5 Feature: gene Location: 4263399-4264721 bp Ori: ABE64581.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4263687-4264344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4263687-4264344 bp Feature: domain Description: GIIM Note: maturase Location: 4264416-4264623 bp Feature: domain Description: GIIM Note: maturase Location: 426441 6-4264623 bp Feature: gene Location: 4265150-4265629 bp Ori: ABE64582.1 Feature: domain Description: DUF4096 Location: 4265213-4265432 bp Feature: domain Description: DUF4096 Location: 426521 3-4265432 bp Feature: gene Location: 4266988-4267629 bp Ori: ABE64583.1 Feature: domain Description: IS5 Location: 4267180-4267540 bp Feature: domain Description: IS5 Location: 42671 80-4267540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4096 (pfam13340), IS5 (COG3039)

Seq: CP000320.1 Nitrobacter hamburgensis X14 plasmid 1, complete sequence (294829 bp)
Overview 1 RT 1: 74464-78915 bp Neighborhood of RT #1 [74464, 78980] DDE_Tnp_1 RVT-GII GIIM DUF4096 COG3547 Feature: gene Location: 74464-74946 bp Feature: gene Location: 75034-75471 bp Ori: ABE64762.1 Feature: domain Description: DDE_Tnp_1 Location: 75067-75439 bp Feature: domain Description: DDE_Tnp_1 Location: 75067-75439 bp Feature: gene Location: 75542-76864 bp Ori: ABE64763.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75830-76487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75830-76487 bp Feature: domain Description: GIIM Note: maturase Location: 76559-76766 bp Feature: domain Description: GIIM Note: maturase Location: 76559-76766 bp Feature: gene Location: 77293-77769 bp Ori: ABE64764.1 Feature: domain Description: DUF4096 Location: 77365-77584 bp Feature: domain Description: DUF4096 Location: 77365-77584 bp Feature: gene Location: 77856-78980 bp Ori: ABE64765.1 Feature: domain Description: COG3547 Location: 77952-78915 bp Feature: domain Description: COG3547 Location: 77952 -78915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), DUF4096 (pfam13340), COG3547 (Transposase )